Ensembl Genes (ENSMUST00000001538 - Ensembl 65)
  Ensembl Gene Link: ENSMUSG00000001497
Ensembl Gene Tree: ENSMUSG00000001497
Ensembl Transcript: ENSMUST00000001538
Ensembl Protein: ENSMUSP00000001538
Gene Name: Pax9
Ensembl Type: protein_coding
CCDS: CCDS25924.1

Position: chr12:57796626-57813809
Band: 12qC1
Genomic Size: 17184
Strand: +
Gene Symbol: ENSMUSG00000001497
CDS Start: complete
CDS End: complete

Links to sequence:

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Source data version: 65
Data last updated at UCSC: 2011-10-12


These gene predictions were generated by Ensembl.

For more information on the different gene tracks, see our Genes FAQ.


For a description of the methods used in Ensembl gene predictions, please refer to Hubbard et al. (2002), also listed in the References section below.

Data access

Ensembl Gene data can be explored interactively using the Table Browser or the Data Integrator. For local downloads, the genePred format files for mm9 are available in our downloads directory as ensGene.txt.gz or in our genes download directory in GTF format.

For programmatic access, the data can be queried from the REST API or directly from our public MySQL servers. Instructions on this method are available on our MySQL help page and on our blog.

Previous versions of this track can be found on our archive download server.


We would like to thank Ensembl for providing these gene annotations. For more information, please see Ensembl's genome annotation page.


Hubbard T, Barker D, Birney E, Cameron G, Chen Y, Clark L, Cox T, Cuff J, Curwen V, Down T et al. The Ensembl genome database project. Nucleic Acids Res. 2002 Jan 1;30(1):38-41. PMID: 11752248; PMC: PMC99161