DQ586319
 

Information on mRNA DQ586319

Description: Homo sapiens piRNA piR-53431, complete sequence.
Gene: n/a
Product: n/a
Author: Girard,A., Sachidanandam,R., Hannon,G.J. and Carmell,M.A.
Organism: Homo sapiens
Tissue: n/a
Development stage: n/a
Cell line: n/a
Sex: n/a
Library: n/a
Clone: n/a
CDS: n/a
Date: 2008-11-02
Version: 1
mRNA sequence: DQ586319
Position: chr2:113096075-113096103

mRNA/Genomic Alignments

The alignment you clicked on is first in the table below.
BROWSER | SIZE IDENTITY CHROMOSOME  STRAND    START     END              QUERY      START  END  TOTAL
-----------------------------------------------------------------------------------------------------
browser |    29  100.0%          2     - 113096075 113096103              DQ586319     1    29    29
browser |    29  100.0%          1     +   1410011   1410039              DQ586319     1    29    29
browser |    29  100.0%          1     +   1580547   1580575              DQ586319     1    29    29
browser |    29  100.0%          1     -   6304609   6304637              DQ586319     1    29    29
browser |    29  100.0%          1     -   6714722   6714750              DQ586319     1    29    29
browser |    29  100.0%          1     -   7600697   7600725              DQ586319     1    29    29
browser |    29  100.0%          1     +   8502861   8502889              DQ586319     1    29    29
browser |    29  100.0%          1     +   8912546   8912574              DQ586319     1    29    29
browser |    29  100.0%          1     +  10029523  10029551              DQ586319     1    29    29
browser |    29  100.0%          1     -  11249633  11249661              DQ586319     1    29    29
browser |    29  100.0%          1     -  12007965  12007993              DQ586319     1    29    29
browser |    29  100.0%          1     +  12903432  12903460              DQ586319     1    29    29
browser |    29  100.0%          1     -  13298331  13298359              DQ586319     1    29    29
browser |    29  100.0%          1     +  13658834  13658862              DQ586319     1    29    29
browser |    29  100.0%          1     -  15136064  15136092              DQ586319     1    29    29
browser |    29  100.0%          1     -  15379751  15379779              DQ586319     1    29    29
browser |    29  100.0%          1     +  20817016  20817044              DQ586319     1    29    29
browser |    29  100.0%          1     +  21054243  21054271              DQ586319     1    29    29
browser |    29  100.0%          1     +  21389528  21389556              DQ586319     1    29    29
browser |    29  100.0%          1     -  21502252  21502280              DQ586319     1    29    29
browser |    29  100.0%          1     +  23504744  23504772              DQ586319     1    29    29
browser |    29  100.0%          1     +  23853837  23853865              DQ586319     1    29    29
browser |    29  100.0%          1     +  23936259  23936287              DQ586319     1    29    29
browser |    29  100.0%          1     -  23992934  23992962              DQ586319     1    29    29
browser |    29  100.0%          1     -  24031641  24031669              DQ586319     1    29    29
browser |    29  100.0%          1     -  24832493  24832521              DQ586319     1    29    29
browser |    29  100.0%          1     +  26597271  26597299              DQ586319     1    29    29
browser |    29  100.0%          1     -  26803095  26803123              DQ586319     1    29    29
browser |    29  100.0%          1     +  27065318  27065346              DQ586319     1    29    29
browser |    29  100.0%          1     +  27220931  27220959              DQ586319     1    29    29
browser |    29  100.0%          1     -  27288565  27288593              DQ586319     1    29    29
browser |    29  100.0%          1     -  29338814  29338842              DQ586319     1    29    29
browser |    29  100.0%          1     -  32803955  32803983              DQ586319     1    29    29
browser |    29  100.0%          1     -  77869157  77869185              DQ586319     1    29    29
browser |    29  100.0%          1     +  86217091  86217119              DQ586319     1    29    29
browser |    29  100.0%          1     -  89067598  89067626              DQ586319     1    29    29
browser |    29  100.0%          1     -  89797418  89797446              DQ586319     1    29    29
browser |    29  100.0%          1     -  90891384  90891412              DQ586319     1    29    29
browser |    29  100.0%          1     -  91288594  91288622              DQ586319     1    29    29
browser |    29  100.0%          1     -  96469312  96469340              DQ586319     1    29    29
browser |    29  100.0%          1     -  96761954  96761982              DQ586319     1    29    29
browser |    29  100.0%          1     -  98511997  98512025              DQ586319     1    29    29
browser |    29  100.0%          1     +  99824185  99824213              DQ586319     1    29    29
browser |    29  100.0%          1     + 106413121 106413149              DQ586319     1    29    29
browser |    29  100.0%          1     - 108488562 108488590              DQ586319     1    29    29
browser |    29  100.0%          1     - 108535691 108535719              DQ586319     1    29    29
browser |    29  100.0%          1     + 108676473 108676501              DQ586319     1    29    29
browser |    29  100.0%          1     + 109053955 109053983              DQ586319     1    29    29
browser |    29  100.0%          1     + 109074349 109074377              DQ586319     1    29    29
browser |    29  100.0%          1     - 109176820 109176848              DQ586319     1    29    29
browser |    29  100.0%          1     + 111233965 111233993              DQ586319     1    29    29
browser |    29  100.0%          1     - 111529583 111529611              DQ586319     1    29    29
browser |    29  100.0%          1     - 111607236 111607264              DQ586319     1    29    29
browser |    29  100.0%          1     + 111800315 111800343              DQ586319     1    29    29
browser |    29  100.0%          1     + 112294799 112294827              DQ586319     1    29    29
browser |    29  100.0%          1     + 112640995 112641023              DQ586319     1    29    29
browser |    29  100.0%          1     + 112729174 112729202              DQ586319     1    29    29
browser |    29  100.0%          1     + 112774734 112774762              DQ586319     1    29    29
browser |    29  100.0%          1     - 112897840 112897868              DQ586319     1    29    29
browser |    29  100.0%          1     - 113063147 113063175              DQ586319     1    29    29
browser |    29  100.0%          1     + 113070906 113070934              DQ586319     1    29    29
browser |    29  100.0%          1     + 114058352 114058380              DQ586319     1    29    29
browser |    29  100.0%          1     + 114480252 114480280              DQ586319     1    29    29
browser |    29  100.0%          1     - 114790176 114790204              DQ586319     1    29    29
browser |    29  100.0%          1     + 143639370 143639398              DQ586319     1    29    29
browser |    29  100.0%          1     + 143703912 143703940              DQ586319     1    29    29
browser |    29  100.0%          1     - 144556260 144556288              DQ586319     1    29    29
browser |    29  100.0%          1     + 145765193 145765221              DQ586319     1    29    29
browser |    29  100.0%          1     - 145766209 145766237              DQ586319     1    29    29
browser |    29  100.0%          1     - 147948975 147949003              DQ586319     1    29    29
browser |    29  100.0%          1     - 150728163 150728191              DQ586319     1    29    29
browser |    29  100.0%          1     + 150782299 150782327              DQ586319     1    29    29
browser |    29  100.0%          1     + 150851631 150851659              DQ586319     1    29    29
browser |    29  100.0%          1     + 151601496 151601524              DQ586319     1    29    29
browser |    29  100.0%          1     - 151650816 151650844              DQ586319     1    29    29
browser |    29  100.0%          1     - 151768881 151768909              DQ586319     1    29    29
browser |    29  100.0%          1     - 152144355 152144383              DQ586319     1    29    29
browser |    29  100.0%          1     - 152471619 152471647              DQ586319     1    29    29
browser |    29  100.0%          1     + 153575740 153575768              DQ586319     1    29    29
browser |    29  100.0%          1     + 153583667 153583695              DQ586319     1    29    29
browser |    29  100.0%          1     + 154288185 154288213              DQ586319     1    29    29
browser |    29  100.0%          1     - 155600273 155600301              DQ586319     1    29    29
browser |    29  100.0%          1     - 155627401 155627429              DQ586319     1    29    29
browser |    29  100.0%          1     - 155635613 155635641              DQ586319     1    29    29
browser |    29  100.0%          1     + 155701452 155701480              DQ586319     1    29    29
browser |    29  100.0%          1     + 155835241 155835269              DQ586319     1    29    29
browser |    29  100.0%          1     + 156179427 156179455              DQ586319     1    29    29
browser |    29  100.0%          1     + 156181664 156181692              DQ586319     1    29    29
browser |    29  100.0%          1     + 156328630 156328658              DQ586319     1    29    29
browser |    29  100.0%          1     + 156558896 156558924              DQ586319     1    29    29
browser |    29  100.0%          1     + 159450372 159450400              DQ586319     1    29    29
browser |    29  100.0%          1     - 161616171 161616199              DQ586319     1    29    29
browser |    29  100.0%          1     - 163545722 163545750              DQ586319     1    29    29
browser |    29  100.0%          1     - 167771208 167771236              DQ586319     1    29    29
browser |    29  100.0%          1     - 167805861 167805889              DQ586319     1    29    29
browser |    29  100.0%          1     - 168207382 168207410              DQ586319     1    29    29
browser |    29  100.0%          1     - 220465898 220465926              DQ586319     1    29    29
browser |    29  100.0%          1     + 222489142 222489170              DQ586319     1    29    29
browser |    29  100.0%          1     + 224101491 224101519              DQ586319     1    29    29
browser |    29  100.0%          1     + 224340035 224340063              DQ586319     1    29    29
browser |    29  100.0%          1     + 225616102 225616130              DQ586319     1    29    29
browser |    29  100.0%          1     - 225795808 225795836              DQ586319     1    29    29
browser |    29  100.0%          1     - 226114514 226114542              DQ586319     1    29    29
browser |    29  100.0%          1     + 227133737 227133765              DQ586319     1    29    29
browser |    29  100.0%          1     + 227276848 227276876              DQ586319     1    29    29
browser |    27  100.0%          1     - 227710217 227710243              DQ586319     3    29    29
browser |    29  100.0%          1     - 227869075 227869103              DQ586319     1    29    29
browser |    29  100.0%          1     - 234267093 234267121              DQ586319     1    29    29
browser |    29  100.0%          1     + 235309951 235309979              DQ586319     1    29    29
browser |    29  100.0%          1     + 236387773 236387801              DQ586319     1    29    29
browser |    29  100.0%          1     - 236428187 236428215              DQ586319     1    29    29
browser |    29  100.0%          1     - 237669091 237669119              DQ586319     1    29    29
browser |    29  100.0%          1     + 241416012 241416040              DQ586319     1    29    29
browser |    29  100.0%          1     + 245775485 245775513              DQ586319     1    29    29
browser |    29  100.0%          1     + 246082889 246082917              DQ586319     1    29    29
browser |    29  100.0%          1     + 246363695 246363723              DQ586319     1    29    29
browser |    29  100.0%          1     - 247016518 247016546              DQ586319     1    29    29
browser |    29  100.0%          1     + 247221020 247221048              DQ586319     1    29    29
browser |    29  100.0%          1     + 247522686 247522714              DQ586319     1    29    29
browser |    29  100.0%          1     + 248677336 248677364              DQ586319     1    29    29
browser |    29  100.0%          1     + 248830741 248830769              DQ586319     1    29    29
browser |    29  100.0%          1     - 248911332 248911360              DQ586319     1    29    29
browser |    29  100.0%         10     -   2806179   2806207              DQ586319     1    29    29
browser |    29  100.0%         10     -   6824915   6824943              DQ586319     1    29    29
browser |    29  100.0%         10     -   6833409   6833437              DQ586319     1    29    29
browser |    29  100.0%         10     +   8869690   8869718              DQ586319     1    29    29
browser |    29  100.0%         10     -   9272751   9272779              DQ586319     1    29    29
browser |    29  100.0%         10     -   9855217   9855245              DQ586319     1    29    29
browser |    29  100.0%         10     -  12225976  12226004              DQ586319     1    29    29
browser |    29  100.0%         10     -  12518702  12518730              DQ586319     1    29    29
browser |    29  100.0%         10     -  17628567  17628595              DQ586319     1    29    29
browser |    29  100.0%         10     +  21430973  21431001              DQ586319     1    29    29
browser |    29  100.0%         10     +  21838396  21838424              DQ586319     1    29    29
browser |    29  100.0%         10     +  24657824  24657852              DQ586319     1    29    29
browser |    29  100.0%         10     +  26893674  26893702              DQ586319     1    29    29
browser |    29  100.0%         10     -  27295776  27295804              DQ586319     1    29    29
browser |    29  100.0%         10     +  28655419  28655447              DQ586319     1    29    29
browser |    29  100.0%         10     +  28772432  28772460              DQ586319     1    29    29
browser |    29  100.0%         10     +  29697590  29697618              DQ586319     1    29    29
browser |    29  100.0%         10     -  32233117  32233145              DQ586319     1    29    29
browser |    29  100.0%         10     -  32499818  32499846              DQ586319     1    29    29
browser |    29  100.0%         10     -  32505395  32505423              DQ586319     1    29    29
browser |    29  100.0%         10     -  39455252  39455280              DQ586319     1    29    29
browser |    29  100.0%         10     +  42138774  42138802              DQ586319     1    29    29
browser |    29  100.0%         10     +  42848099  42848127              DQ586319     1    29    29
browser |    29  100.0%         10     +  42901047  42901075              DQ586319     1    29    29
browser |    29  100.0%         10     +  43330391  43330419              DQ586319     1    29    29
browser |    29  100.0%         10     +  43337407  43337435              DQ586319     1    29    29
browser |    29  100.0%         10     -  43445894  43445922              DQ586319     1    29    29
browser |    29  100.0%         10     -  43464587  43464615              DQ586319     1    29    29
browser |    29  100.0%         10     +  43544411  43544439              DQ586319     1    29    29
browser |    29  100.0%         10     +  45260769  45260797              DQ586319     1    29    29
browser |    29  100.0%         10     -  45330295  45330323              DQ586319     1    29    29
browser |    29  100.0%         10     +  45348964  45348992              DQ586319     1    29    29
browser |    29  100.0%         10     -  78075516  78075544              DQ586319     1    29    29
browser |    29  100.0%         10     -  78468153  78468181              DQ586319     1    29    29
browser |    29  100.0%         10     -  79278653  79278681              DQ586319     1    29    29
browser |    29  100.0%         10     +  80535337  80535365              DQ586319     1    29    29
browser |    29  100.0%         10     -  82478468  82478496              DQ586319     1    29    29
browser |    29  100.0%         10     +  83520957  83520985              DQ586319     1    29    29
browser |    29  100.0%         10     -  84180095  84180123              DQ586319     1    29    29
browser |    29  100.0%         10     -  84346996  84347024              DQ586319     1    29    29
browser |    29  100.0%         10     +  86455454  86455482              DQ586319     1    29    29
browser |    29  100.0%         10     +  87081721  87081749              DQ586319     1    29    29
browser |    29  100.0%         10     -  91322703  91322731              DQ586319     1    29    29
browser |    29  100.0%         10     +  92377206  92377234              DQ586319     1    29    29
browser |    29  100.0%         10     -  92673945  92673973              DQ586319     1    29    29
browser |    29  100.0%         10     +  92976437  92976465              DQ586319     1    29    29
browser |    29  100.0%         10     +  93971384  93971412              DQ586319     1    29    29
browser |    29  100.0%         10     -  95808938  95808966              DQ586319     1    29    29
browser |    29  100.0%         10     -  96940530  96940558              DQ586319     1    29    29
browser |    29  100.0%         10     +  97277370  97277398              DQ586319     1    29    29
browser |    29  100.0%         10     -  97417886  97417914              DQ586319     1    29    29
browser |    29  100.0%         10     -  97527666  97527694              DQ586319     1    29    29
browser |    29  100.0%         10     -  99821572  99821600              DQ586319     1    29    29
browser |    29  100.0%         10     -  99837687  99837715              DQ586319     1    29    29
browser |    29  100.0%         10     +  99892531  99892559              DQ586319     1    29    29
browser |    29  100.0%         10     + 100094318 100094346              DQ586319     1    29    29
browser |    29  100.0%         10     + 100278606 100278634              DQ586319     1    29    29
browser |    29  100.0%         10     + 102036647 102036675              DQ586319     1    29    29
browser |    29  100.0%         10     - 102301196 102301224              DQ586319     1    29    29
browser |    29  100.0%         10     + 102391650 102391678              DQ586319     1    29    29
browser |    29  100.0%         10     + 103130328 103130356              DQ586319     1    29    29
browser |    29  100.0%         10     + 103607925 103607953              DQ586319     1    29    29
browser |    29  100.0%         10     + 104785355 104785383              DQ586319     1    29    29
browser |    29  100.0%         10     - 110766540 110766568              DQ586319     1    29    29
browser |    29  100.0%  10_GL383545v1_alt     -     10122     10150              DQ586319     1    29    29
browser |    29  100.0%  10_GL383546v1_alt     +     85537     85565              DQ586319     1    29    29
browser |    29  100.0%  10_GL383546v1_alt     -    155064    155092              DQ586319     1    29    29
browser |    29  100.0%  10_GL383546v1_alt     -    175888    175916              DQ586319     1    29    29
browser |    29  100.0%  10_GL383546v1_alt     +    189794    189822              DQ586319     1    29    29
browser |    29  100.0%  10_GL383546v1_alt     +    233312    233340              DQ586319     1    29    29
browser |    29  100.0%  10_KI270824v1_alt     +     35535     35563              DQ586319     1    29    29
browser |    29  100.0%         11     +   2333237   2333265              DQ586319     1    29    29
browser |    29  100.0%         11     -   4136984   4137012              DQ586319     1    29    29
browser |    29  100.0%         11     +   4283788   4283816              DQ586319     1    29    29
browser |    29  100.0%         11     -   4334135   4334163              DQ586319     1    29    29
browser |    29  100.0%         11     +   5934988   5935016              DQ586319     1    29    29
browser |    29  100.0%         11     +   5961521   5961549              DQ586319     1    29    29
browser |    29  100.0%         11     -   6690846   6690874              DQ586319     1    29    29
browser |    29  100.0%         11     +   8524089   8524117              DQ586319     1    29    29
browser |    29  100.0%         11     +   8979297   8979325              DQ586319     1    29    29
browser |    29  100.0%         11     -  10392044  10392072              DQ586319     1    29    29
browser |    29  100.0%         11     -  15686016  15686044              DQ586319     1    29    29
browser |    29  100.0%         11     +  16888616  16888644              DQ586319     1    29    29
browser |    29  100.0%         11     +  16908037  16908065              DQ586319     1    29    29
browser |    29  100.0%         11     -  17049816  17049844              DQ586319     1    29    29
browser |    29  100.0%         11     +  19740335  19740363              DQ586319     1    29    29
browser |    29  100.0%         11     +  20549385  20549413              DQ586319     1    29    29
browser |    29  100.0%         11     +  24446290  24446318              DQ586319     1    29    29
browser |    29  100.0%         11     +  28431553  28431581              DQ586319     1    29    29
browser |    29  100.0%         11     +  33986774  33986802              DQ586319     1    29    29
browser |    29  100.0%         11     +  36145779  36145807              DQ586319     1    29    29
browser |    29  100.0%         11     -  37430678  37430706              DQ586319     1    29    29
browser |    29  100.0%         11     +  44664397  44664425              DQ586319     1    29    29
browser |    29  100.0%         11     -  45737741  45737769              DQ586319     1    29    29
browser |    29  100.0%         11     +  46585124  46585152              DQ586319     1    29    29
browser |    29  100.0%         11     -  47037601  47037629              DQ586319     1    29    29
browser |    29  100.0%         11     -  49797758  49797786              DQ586319     1    29    29
browser |    29  100.0%         11     -  49911310  49911338              DQ586319     1    29    29
browser |    29  100.0%         11     -  50062768  50062796              DQ586319     1    29    29
browser |    29  100.0%         11     -  57715797  57715825              DQ586319     1    29    29
browser |    29  100.0%         11     -  57943407  57943435              DQ586319     1    29    29
browser |    29  100.0%         11     -  60072731  60072759              DQ586319     1    29    29
browser |    29  100.0%         11     -  60200505  60200533              DQ586319     1    29    29
browser |    29  100.0%         11     -  77097685  77097713              DQ586319     1    29    29
browser |    29  100.0%         11     +  77490902  77490930              DQ586319     1    29    29
browser |    29  100.0%         11     +  78880227  78880255              DQ586319     1    29    29
browser |    29  100.0%         11     +  79192541  79192569              DQ586319     1    29    29
browser |    29  100.0%         11     +  79804837  79804865              DQ586319     1    29    29
browser |    29  100.0%         11     +  82182637  82182665              DQ586319     1    29    29
browser |    29  100.0%         11     +  83133954  83133982              DQ586319     1    29    29
browser |    29  100.0%         11     -  83315831  83315859              DQ586319     1    29    29
browser |    29  100.0%         11     +  86111899  86111927              DQ586319     1    29    29
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browser |    29  100.0%  12_KI270835v1_alt     -     71252     71280              DQ586319     1    29    29
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browser |    29  100.0%  12_KN538369v1_fix     +    535684    535712              DQ586319     1    29    29
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browser |    29  100.0%  13_KI270840v1_alt     +     21846     21874              DQ586319     1    29    29
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browser |    29   96.6%  13_KN538372v1_fix     +    249819    249847              DQ586319     1    29    29
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browser |    29  100.0%         14     - 105110997 105111025              DQ586319     1    29    29
browser |    29  100.0%  14_GL000009v2_random     +    200580    200608              DQ586319     1    29    29
browser |    29  100.0%  14_GL000194v1_random     +    191249    191277              DQ586319     1    29    29
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browser |    29  100.0%         15     - 101860712 101860740              DQ586319     1    29    29
browser |    29  100.0%  15_KI270905v1_alt     +    205239    205267              DQ586319     1    29    29
browser |    29  100.0%  15_KN538374v1_fix     +    205239    205267              DQ586319     1    29    29
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browser |    29  100.0%         16     +   1600226   1600254              DQ586319     1    29    29
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browser |    29  100.0%         16     +  13889968  13889996              DQ586319     1    29    29
browser |    29  100.0%         16     -  14532391  14532419              DQ586319     1    29    29
browser |    29  100.0%         16     -  14636874  14636902              DQ586319     1    29    29
browser |    29  100.0%         16     -  16618610  16618638              DQ586319     1    29    29
browser |    29  100.0%         16     -  17505228  17505256              DQ586319     1    29    29
browser |    29  100.0%         16     +  18735023  18735052              DQ586319     1    29    29
browser |    29  100.0%         16     +  19003805  19003833              DQ586319     1    29    29
browser |    29  100.0%         16     +  23599680  23599708              DQ586319     1    29    29
browser |    29  100.0%         16     -  24108567  24108595              DQ586319     1    29    29
browser |    29  100.0%         16     +  28377915  28377943              DQ586319     1    29    29
browser |    29  100.0%         16     +  28417590  28417618              DQ586319     1    29    29
browser |    29  100.0%         16     +  28449339  28449367              DQ586319     1    29    29
browser |    29  100.0%         16     +  30170683  30170711              DQ586319     1    29    29
browser |    29  100.0%         16     +  31170076  31170104              DQ586319     1    29    29
browser |    29  100.0%         16     +  31837178  31837206              DQ586319     1    29    29
browser |    29  100.0%         16     +  34999010  34999038              DQ586319     1    29    29
browser |    29  100.0%         16     -  46694074  46694102              DQ586319     1    29    29
browser |    29  100.0%         16     +  47001065  47001093              DQ586319     1    29    29
browser |    29  100.0%         16     +  47181955  47181983              DQ586319     1    29    29
browser |    29  100.0%         16     +  47864663  47864691              DQ586319     1    29    29
browser |    29  100.0%         16     -  48058752  48058780              DQ586319     1    29    29
browser |    29  100.0%         16     -  48400767  48400795              DQ586319     1    29    29
browser |    29  100.0%         16     -  48482652  48482680              DQ586319     1    29    29
browser |    29  100.0%         16     +  53540023  53540051              DQ586319     1    29    29
browser |    29  100.0%         16     +  53625915  53625943              DQ586319     1    29    29
browser |    29  100.0%         16     +  53699163  53699191              DQ586319     1    29    29
browser |    29  100.0%         16     -  57200120  57200148              DQ586319     1    29    29
browser |    29  100.0%         16     -  58395545  58395573              DQ586319     1    29    29
browser |    26  100.0%         16     +  66514939  66514964              DQ586319     1    26    29
browser |    28  100.0%         16     +  66631704  66631731              DQ586319     1    28    29
browser |    29  100.0%         16     -  68162962  68162990              DQ586319     1    29    29
browser |    29  100.0%         16     -  68278527  68278555              DQ586319     1    29    29
browser |    27  100.0%         16     -  69280076  69280102              DQ586319     3    29    29
browser |    29  100.0%         16     +  70052722  70052750              DQ586319     1    29    29
browser |    29  100.0%         16     +  70205727  70205755              DQ586319     1    29    29
browser |    29  100.0%         16     -  70224383  70224411              DQ586319     1    29    29
browser |    29  100.0%         16     +  71590022  71590050              DQ586319     1    29    29
browser |    29  100.0%         16     +  72497294  72497322              DQ586319     1    29    29
browser |    29  100.0%         16     -  74800128  74800156              DQ586319     1    29    29
browser |    29  100.0%         16     -  76499774  76499802              DQ586319     1    29    29
browser |    29  100.0%         16     +  80244582  80244610              DQ586319     1    29    29
browser |    29  100.0%         16     -  84767993  84768021              DQ586319     1    29    29
browser |    29  100.0%         16     -  85807827  85807855              DQ586319     1    29    29
browser |    27  100.0%         16     +  87719443  87719469              DQ586319     3    29    29
browser |    29  100.0%         16     -  89806564  89806592              DQ586319     1    29    29
browser |    29  100.0%  16_KI270853v1_alt     -    105248    105276              DQ586319     1    29    29
browser |    29  100.0%  16_KI270853v1_alt     -    209730    209758              DQ586319     1    29    29
browser |    29  100.0%  16_KI270853v1_alt     -   2279664   2279692              DQ586319     1    29    29
browser |    29   96.6%  16_KV880768v1_fix     -     46213     46241              DQ586319     1    29    29
browser |    29  100.0%         17     +    572802    572830              DQ586319     1    29    29
browser |    29  100.0%         17     +    599525    599553              DQ586319     1    29    29
browser |    29  100.0%         17     +   1215948   1215976              DQ586319     1    29    29
browser |    29  100.0%         17     -   1246738   1246766              DQ586319     1    29    29
browser |    29  100.0%         17     -   1402860   1402888              DQ586319     1    29    29
browser |    29  100.0%         17     -   1688790   1688818              DQ586319     1    29    29
browser |    29  100.0%         17     +   2255957   2255985              DQ586319     1    29    29
browser |    29  100.0%         17     +   2448517   2448545              DQ586319     1    29    29
browser |    29  100.0%         17     +   2507900   2507928              DQ586319     1    29    29
browser |    29  100.0%         17     -   3112052   3112080              DQ586319     1    29    29
browser |    29  100.0%         17     -   3370841   3370869              DQ586319     1    29    29
browser |    29  100.0%         17     +   3465553   3465581              DQ586319     1    29    29
browser |    29  100.0%         17     -   3563896   3563924              DQ586319     1    29    29
browser |    29  100.0%         17     +   3634041   3634069              DQ586319     1    29    29
browser |    29  100.0%         17     +   3854876   3854904              DQ586319     1    29    29
browser |    29  100.0%         17     +   5143528   5143556              DQ586319     1    29    29
browser |    29  100.0%         17     -   5721060   5721088              DQ586319     1    29    29
browser |    29  100.0%         17     +   6226852   6226880              DQ586319     1    29    29
browser |    29  100.0%         17     -   8367794   8367822              DQ586319     1    29    29
browser |    29  100.0%         17     +   8374398   8374426              DQ586319     1    29    29
browser |    29  100.0%         17     +   8550914   8550942              DQ586319     1    29    29
browser |    29  100.0%         17     +  10058021  10058049              DQ586319     1    29    29
browser |    29  100.0%         17     +  15638021  15638049              DQ586319     1    29    29
browser |    29  100.0%         17     +  15868145  15868173              DQ586319     1    29    29
browser |    29  100.0%         17     -  16311674  16311702              DQ586319     1    29    29
browser |    29  100.0%         17     -  17441877  17441905              DQ586319     1    29    29
browser |    29  100.0%         17     -  17911869  17911897              DQ586319     1    29    29
browser |    29  100.0%         17     -  19505689  19505717              DQ586319     1    29    29
browser |    29  100.0%         17     -  19627338  19627366              DQ586319     1    29    29
browser |    29  100.0%         17     -  28455625  28455653              DQ586319     1    29    29
browser |    29  100.0%         17     -  28603668  28603696              DQ586319     1    29    29
browser |    29  100.0%         17     -  29532560  29532588              DQ586319     1    29    29
browser |    29  100.0%         17     +  77777417  77777445              DQ586319     1    29    29
browser |    29  100.0%         17     +  78466204  78466232              DQ586319     1    29    29
browser |    29  100.0%         17     -  80537063  80537091              DQ586319     1    29    29
browser |    29  100.0%         17     -  80551943  80551971              DQ586319     1    29    29
browser |    29  100.0%         17     -  80601782  80601810              DQ586319     1    29    29
browser |    29  100.0%         17     +  81618977  81619005              DQ586319     1    29    29
browser |    29  100.0%         17     +  82377238  82377266              DQ586319     1    29    29
browser |    29  100.0%         17     -  82453415  82453443              DQ586319     1    29    29
browser |    29  100.0%         17     -  82774265  82774293              DQ586319     1    29    29
browser |    29  100.0%  17_GL000258v2_alt     +    216930    216958              DQ586319     1    29    29
browser |    29  100.0%  17_GL000258v2_alt     +    434865    434893              DQ586319     1    29    29
browser |    29  100.0%  17_GL000258v2_alt     +    502239    502267              DQ586319     1    29    29
browser |    29  100.0%  17_GL000258v2_alt     +    534085    534113              DQ586319     1    29    29
browser |    29  100.0%  17_GL000258v2_alt     -    709962    709990              DQ586319     1    29    29
browser |    29  100.0%  17_GL000258v2_alt     -   1222292   1222320              DQ586319     1    29    29
browser |    29  100.0%  17_GL000258v2_alt     +   1238027   1238055              DQ586319     1    29    29
browser |    29  100.0%  17_GL000258v2_alt     +   1248080   1248108              DQ586319     1    29    29
browser |    29   96.6%  17_GL000258v2_alt     +   1441570   1441598              DQ586319     1    29    29
browser |    29  100.0%  17_GL000258v2_alt     -   1520530   1520558              DQ586319     1    29    29
browser |    29  100.0%  17_KI270857v1_alt     +    375170    375198              DQ586319     1    29    29
browser |    29  100.0%  17_KI270857v1_alt     +   1805575   1805603              DQ586319     1    29    29
browser |    29  100.0%  17_KI270857v1_alt     +   2288864   2288892              DQ586319     1    29    29
browser |    29  100.0%  17_KI270857v1_alt     +   2667362   2667390              DQ586319     1    29    29
browser |    29  100.0%  17_KI270861v1_alt     -    118818    118846              DQ586319     1    29    29
browser |    29  100.0%  17_KI270862v1_alt     -    344886    344914              DQ586319     1    29    29
browser |    29  100.0%  17_KI270908v1_alt     -    939970    939998              DQ586319     1    29    29
browser |    29  100.0%  17_KI270908v1_alt     -    955007    955035              DQ586319     1    29    29
browser |    29  100.0%  17_KI270908v1_alt     -    986741    986769              DQ586319     1    29    29
browser |    28   96.5%  17_KI270908v1_alt     -   1054101   1054128              DQ586319     1    28    29
browser |    29  100.0%  17_KI270909v1_alt     +     94354     94382              DQ586319     1    29    29
browser |    29  100.0%  17_KV766196v1_fix     +    132279    132307              DQ586319     1    29    29
browser |    29  100.0%  17_KV766196v1_fix     +    159002    159030              DQ586319     1    29    29
browser |    29  100.0%  17_KV766198v1_alt     +     59201     59229              DQ586319     1    29    29
browser |    27  100.0%  17_KV766198v1_alt     +     99193     99219              DQ586319     1    27    29
browser |    29   96.6%  17_KV766198v1_alt     +    207073    207101              DQ586319     1    29    29
browser |    29  100.0%         18     -   2001549   2001577              DQ586319     1    29    29
browser |    29  100.0%         18     -   2867565   2867593              DQ586319     1    29    29
browser |    29  100.0%         18     +   3050188   3050216              DQ586319     1    29    29
browser |    29  100.0%         18     -   4918015   4918043              DQ586319     1    29    29
browser |    29  100.0%         18     -   6826902   6826930              DQ586319     1    29    29
browser |    29  100.0%         18     +   7099241   7099269              DQ586319     1    29    29
browser |    29  100.0%         18     -   9023843   9023871              DQ586319     1    29    29
browser |    29  100.0%         18     +  11609191  11609219              DQ586319     1    29    29
browser |    28  100.0%         18     +  11648491  11648518              DQ586319     1    28    29
browser |    29  100.0%         18     +  11960440  11960468              DQ586319     1    29    29
browser |    29  100.0%         18     +  12875081  12875109              DQ586319     1    29    29
browser |    29  100.0%         18     -  12979283  12979311              DQ586319     1    29    29
browser |    29  100.0%         18     -  14010172  14010200              DQ586319     1    29    29
browser |    29  100.0%         18     +  14225431  14225459              DQ586319     1    29    29
browser |    29  100.0%         18     -  14382390  14382418              DQ586319     1    29    29
browser |    29  100.0%         18     -  21137246  21137274              DQ586319     1    29    29
browser |    29  100.0%         18     -  21591884  21591912              DQ586319     1    29    29
browser |    29  100.0%         18     +  27476636  27476664              DQ586319     1    29    29
browser |    29  100.0%         18     -  33147584  33147612              DQ586319     1    29    29
browser |    29  100.0%         18     +  47828705  47828733              DQ586319     1    29    29
browser |    29  100.0%         18     -  49079619  49079647              DQ586319     1    29    29
browser |    29  100.0%         18     +  49203626  49203654              DQ586319     1    29    29
browser |    29  100.0%         18     -  49577232  49577260              DQ586319     1    29    29
browser |    29  100.0%         18     -  51116771  51116799              DQ586319     1    29    29
browser |    29  100.0%         18     -  51360729  51360757              DQ586319     1    29    29
browser |    29  100.0%         18     +  54344347  54344375              DQ586319     1    29    29
browser |    29  100.0%         18     +  59256199  59256227              DQ586319     1    29    29
browser |    29  100.0%         18     -  63449986  63450014              DQ586319     1    29    29
browser |    29  100.0%         18     +  66894692  66894720              DQ586319     1    29    29
browser |    29  100.0%         18     +  70103530  70103558              DQ586319     1    29    29
browser |    29  100.0%         18     +  76001683  76001711              DQ586319     1    29    29
browser |    29  100.0%         18     +  76646227  76646255              DQ586319     1    29    29
browser |    29  100.0%         18     -  77028205  77028233              DQ586319     1    29    29
browser |    29  100.0%         18     -  79072366  79072394              DQ586319     1    29    29
browser |    28  100.0%  18_GL383567v1_alt     -    124908    124935              DQ586319     1    28    29
browser |    29  100.0%  18_GL383572v1_alt     -    142916    142944              DQ586319     1    29    29
browser |    29  100.0%  18_KI270911v1_alt     -    141079    141107              DQ586319     1    29    29
browser |    29  100.0%         19     +    386876    386904              DQ586319     1    29    29
browser |    29  100.0%         19     -   1498828   1498856              DQ586319     1    29    29
browser |    29  100.0%         19     +   5702791   5702819              DQ586319     1    29    29
browser |    29  100.0%         19     +   6356245   6356273              DQ586319     1    29    29
browser |    29  100.0%         19     -   6513491   6513519              DQ586319     1    29    29
browser |    29  100.0%         19     +   9484065   9484093              DQ586319     1    29    29
browser |    29  100.0%         19     +   9680698   9680726              DQ586319     1    29    29
browser |    29  100.0%         19     -  11276338  11276366              DQ586319     1    29    29
browser |    29  100.0%         19     +  11303330  11303358              DQ586319     1    29    29
browser |    29  100.0%         19     -  12232558  12232586              DQ586319     1    29    29
browser |    29  100.0%         19     +  12622126  12622154              DQ586319     1    29    29
browser |    29  100.0%         19     +  13704300  13704328              DQ586319     1    29    29
browser |    29  100.0%         19     +  15363931  15363959              DQ586319     1    29    29
browser |    29  100.0%         19     +  17919265  17919293              DQ586319     1    29    29
browser |    29  100.0%         19     -  18005205  18005233              DQ586319     1    29    29
browser |    29  100.0%         19     +  19770592  19770620              DQ586319     1    29    29
browser |    29  100.0%         19     +  20138382  20138410              DQ586319     1    29    29
browser |    29  100.0%         19     -  20148988  20149016              DQ586319     1    29    29
browser |    29  100.0%         19     -  20152248  20152276              DQ586319     1    29    29
browser |    29  100.0%         19     -  20157075  20157103              DQ586319     1    29    29
browser |    29  100.0%         19     -  20175546  20175574              DQ586319     1    29    29
browser |    29  100.0%         19     +  20215066  20215094              DQ586319     1    29    29
browser |    29  100.0%         19     +  20296988  20297016              DQ586319     1    29    29
browser |    29  100.0%         19     +  20466530  20466558              DQ586319     1    29    29
browser |    29  100.0%         19     -  20529296  20529324              DQ586319     1    29    29
browser |    29  100.0%         19     -  20952265  20952293              DQ586319     1    29    29
browser |    29  100.0%         19     -  21048399  21048427              DQ586319     1    29    29
browser |    29  100.0%         19     -  21212175  21212203              DQ586319     1    29    29
browser |    29  100.0%         19     -  21486540  21486568              DQ586319     1    29    29
browser |    29  100.0%         19     -  21510795  21510823              DQ586319     1    29    29
browser |    29  100.0%         19     +  21568148  21568176              DQ586319     1    29    29
browser |    29  100.0%         19     -  27638325  27638353              DQ586319     1    29    29
browser |    29  100.0%  19_GL383573v1_alt     -    295541    295569              DQ586319     1    29    29
browser |    29  100.0%  19_GL383575v2_alt     -     11189     11217              DQ586319     1    29    29
browser |    29  100.0%  19_GL383575v2_alt     -     19693     19721              DQ586319     1    29    29
browser |    29  100.0%  19_GL383575v2_alt     +     69654     69682              DQ586319     1    29    29
browser |    29  100.0%  19_GL383575v2_alt     +     83671     83699              DQ586319     1    29    29
browser |    29  100.0%  19_GL383575v2_alt     +    137613    137641              DQ586319     1    29    29
browser |    29  100.0%  19_GL383576v1_alt     +     76551     76579              DQ586319     1    29    29
browser |    29  100.0%  19_GL949746v1_alt     -    811592    811620              DQ586319     1    29    29
browser |    29  100.0%  19_GL949746v1_alt     +    847329    847357              DQ586319     1    29    29
browser |    29   96.6%  19_GL949746v1_alt     -    854415    854443              DQ586319     1    29    29
browser |    29  100.0%  19_GL949747v2_alt     -    553385    553413              DQ586319     1    29    29
browser |    29  100.0%  19_GL949747v2_alt     +    589133    589161              DQ586319     1    29    29
browser |    29   96.6%  19_GL949747v2_alt     -    596219    596247              DQ586319     1    29    29
browser |    29  100.0%  19_GL949748v2_alt     -    888180    888208              DQ586319     1    29    29
browser |    29  100.0%  19_GL949748v2_alt     +    923917    923945              DQ586319     1    29    29
browser |    29   96.6%  19_GL949748v2_alt     -    931003    931031              DQ586319     1    29    29
browser |    29  100.0%  19_GL949749v2_alt     -    915717    915745              DQ586319     1    29    29
browser |    29  100.0%  19_GL949749v2_alt     +    951454    951482              DQ586319     1    29    29
browser |    29   96.6%  19_GL949749v2_alt     -    958540    958568              DQ586319     1    29    29
browser |    29  100.0%  19_GL949750v2_alt     -    890266    890294              DQ586319     1    29    29
browser |    29  100.0%  19_GL949750v2_alt     +    926003    926031              DQ586319     1    29    29
browser |    29   96.6%  19_GL949750v2_alt     -    933089    933117              DQ586319     1    29    29
browser |    29   96.6%  19_GL949751v2_alt     -    189476    189504              DQ586319     1    29    29
browser |    29  100.0%  19_GL949751v2_alt     -    826559    826587              DQ586319     1    29    29
browser |    29  100.0%  19_GL949751v2_alt     +    862296    862324              DQ586319     1    29    29
browser |    29  100.0%  19_GL949752v1_alt     -    812561    812589              DQ586319     1    29    29
browser |    29  100.0%  19_GL949752v1_alt     +    848288    848316              DQ586319     1    29    29
browser |    29   96.6%  19_GL949752v1_alt     -    855375    855403              DQ586319     1    29    29
browser |    29  100.0%  19_GL949753v2_alt     -    620355    620383              DQ586319     1    29    29
browser |    29  100.0%  19_GL949753v2_alt     +    656092    656120              DQ586319     1    29    29
browser |    29   96.6%  19_GL949753v2_alt     -    663178    663206              DQ586319     1    29    29
browser |    29  100.0%  19_KI270867v1_alt     -     36342     36370              DQ586319     1    29    29
browser |    29  100.0%  19_KI270917v1_alt     -    187150    187178              DQ586319     1    29    29
browser |    29  100.0%  19_KI270920v1_alt     -    194223    194251              DQ586319     1    29    29
browser |    29  100.0%  19_KI270921v1_alt     -    278442    278470              DQ586319     1    29    29
browser |    29  100.0%  19_KI270922v1_alt     -    184153    184181              DQ586319     1    29    29
browser |    29  100.0%  19_KI270923v1_alt     -    185570    185598              DQ586319     1    29    29
browser |    29  100.0%  19_KI270929v1_alt     -    182421    182449              DQ586319     1    29    29
browser |    29  100.0%  19_KI270938v1_alt     -    890676    890704              DQ586319     1    29    29
browser |    29  100.0%  19_KI270938v1_alt     +    926413    926441              DQ586319     1    29    29
browser |    29   96.6%  19_KI270938v1_alt     -    933499    933527              DQ586319     1    29    29
browser |    29  100.0%  19_KN196484v1_fix     -    235107    235135              DQ586319     1    29    29
browser |    29  100.0%  19_KQ458386v1_fix     -     41504     41532              DQ586319     1    29    29
browser |    29  100.0%  19_KQ458386v1_fix     -    207024    207052              DQ586319     1    29    29
browser |    29   96.6%  19_KQ458386v1_fix     +    217564    217592              DQ586319     1    29    29
browser |    29  100.0%  19_KQ458386v1_fix     -    264857    264885              DQ586319     1    29    29
browser |    29  100.0%  19_KV575250v1_alt     -    237276    237304              DQ586319     1    29    29
browser |    29  100.0%  19_KV575258v1_alt     +      3755      3783              DQ586319     1    29    29
browser |    29  100.0%  1_GL383520v2_alt     -    225244    225272              DQ586319     1    29    29
browser |    29  100.0%  1_KI270765v1_alt     -     67555     67583              DQ586319     1    29    29
browser |    29  100.0%  1_KI270766v1_alt     -    241799    241827              DQ586319     1    29    29
browser |    29  100.0%  1_KN196473v1_fix     +     84889     84917              DQ586319     1    29    29
browser |    29  100.0%  1_KQ031383v1_fix     +     84945     84973              DQ586319     1    29    29
browser |    29  100.0%  1_KQ031383v1_fix     -    452671    452699              DQ586319     1    29    29
browser |    29  100.0%  1_KQ458383v1_alt     +    274723    274751              DQ586319     1    29    29
browser |    29  100.0%  1_KQ983255v1_alt     -    264187    264215              DQ586319     1    29    29
browser |    29   96.6%  1_KV880763v1_alt     -    171848    171876              DQ586319     1    29    29
browser |    29  100.0%  1_KV880763v1_alt     -    500117    500145              DQ586319     1    29    29
browser |    29  100.0%  1_KV880763v1_alt     +    529245    529274              DQ586319     1    29    29
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browser |    29  100.0%  20_GL383577v2_alt     +      8534      8563              DQ586319     1    29    29
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browser |    29   96.6%  21_KI270873v1_alt     -     91257     91285              DQ586319     1    29    29
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browser |    29  100.0%         22     +  42982646  42982674              DQ586319     1    29    29
browser |    29  100.0%  22_KI270733v1_random     -     84509     84537              DQ586319     1    29    29
browser |    29  100.0%  22_KI270875v1_alt     +     78027     78055              DQ586319     1    29    29
browser |    29   96.6%  22_KI270878v1_alt     -    160774    160802              DQ586319     1    29    29
browser |    29  100.0%  22_KI270879v1_alt     +     92419     92447              DQ586319     1    29    29
browser |    29  100.0%  22_KI270879v1_alt     +    143650    143678              DQ586319     1    29    29
browser |    29   96.6%  22_KI270879v1_alt     +    174029    174057              DQ586319     1    29    29
browser |    29  100.0%  2_KI270767v1_alt     -    105742    105770              DQ586319     1    29    29
browser |    29  100.0%  2_KI270893v1_alt     -    105382    105410              DQ586319     1    29    29
browser |    29  100.0%  2_KN538362v1_fix     +     99488     99516              DQ586319     1    29    29
browser |    29  100.0%  2_KQ031384v1_fix     +     35449     35477              DQ586319     1    29    29
browser |    29  100.0%  2_KQ983256v1_alt     -    280196    280224              DQ586319     1    29    29
browser |    29  100.0%  2_KQ983256v1_alt     -    469402    469430              DQ586319     1    29    29
browser |    29  100.0%  2_KQ983256v1_alt     -    513862    513890              DQ586319     1    29    29
browser |    29  100.0%          3     -   2916417   2916445              DQ586319     1    29    29
browser |    29  100.0%          3     -   5113426   5113454              DQ586319     1    29    29
browser |    29  100.0%          3     -   5283437   5283465              DQ586319     1    29    29
browser |    29  100.0%          3     -   6129335   6129363              DQ586319     1    29    29
browser |    29  100.0%          3     +   8440996   8441024              DQ586319     1    29    29
browser |    29  100.0%          3     +   9570508   9570536              DQ586319     1    29    29
browser |    29  100.0%          3     -   9939547   9939575              DQ586319     1    29    29
browser |    29  100.0%          3     +  10070902  10070930              DQ586319     1    29    29
browser |    29  100.0%          3     -  11487049  11487077              DQ586319     1    29    29
browser |    29  100.0%          3     -  12849252  12849280              DQ586319     1    29    29
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browser |    29  100.0%          5     - 156666653 156666681              DQ586319     1    29    29
browser |    29  100.0%          5     + 156941088 156941116              DQ586319     1    29    29
browser |    29  100.0%          5     + 157014857 157014885              DQ586319     1    29    29
browser |    29  100.0%          5     + 157420408 157420436              DQ586319     1    29    29
browser |    29  100.0%          5     - 158036582 158036610              DQ586319     1    29    29
browser |    29  100.0%          5     + 158583755 158583783              DQ586319     1    29    29
browser |    29  100.0%          5     - 163583273 163583301              DQ586319     1    29    29
browser |    29  100.0%          5     + 165919778 165919806              DQ586319     1    29    29
browser |    29  100.0%          5     + 167860816 167860844              DQ586319     1    29    29
browser |    29  100.0%          5     - 168642869 168642897              DQ586319     1    29    29
browser |    29  100.0%          5     + 171148163 171148191              DQ586319     1    29    29
browser |    29  100.0%          5     - 171403221 171403249              DQ586319     1    29    29
browser |    29  100.0%          5     - 176251796 176251824              DQ586319     1    29    29
browser |    29  100.0%          5     + 176306686 176306714              DQ586319     1    29    29
browser |    29  100.0%          5     + 176434586 176434614              DQ586319     1    29    29
browser |    29  100.0%          5     + 176962921 176962949              DQ586319     1    29    29
browser |    29  100.0%          5     - 177559681 177559709              DQ586319     1    29    29
browser |    29  100.0%          5     - 178518111 178518139              DQ586319     1    29    29
browser |    29  100.0%          5     - 179514698 179514726              DQ586319     1    29    29
browser |    29  100.0%          5     - 179650037 179650065              DQ586319     1    29    29
browser |    29  100.0%          5     - 179834628 179834656              DQ586319     1    29    29
browser |    29  100.0%          5     - 180530782 180530810              DQ586319     1    29    29
browser |    29  100.0%          5     - 180770890 180770918              DQ586319     1    29    29
browser |    29  100.0%          5     + 180827470 180827498              DQ586319     1    29    29
browser |    29  100.0%          5     - 181267596 181267624              DQ586319     1    29    29
browser |    29  100.0%  5_GL339449v2_alt     +      4138      4166              DQ586319     1    29    29
browser |    29  100.0%  5_GL339449v2_alt     -    297639    297667              DQ586319     1    29    29
browser |    29  100.0%  5_GL339449v2_alt     -   1523334   1523362              DQ586319     1    29    29
browser |    29  100.0%  5_KI270897v1_alt     -   1054824   1054852              DQ586319     1    29    29
browser |    29  100.0%  5_KV575244v1_fix     -    279360    279388              DQ586319     1    29    29
browser |    29  100.0%  5_KV575244v1_fix     +    408709    408737              DQ586319     1    29    29
browser |    29  100.0%  5_KV575244v1_fix     -    600188    600216              DQ586319     1    29    29
browser |    29  100.0%          6     +   2908868   2908896              DQ586319     1    29    29
browser |    29  100.0%          6     -   5037224   5037252              DQ586319     1    29    29
browser |    29  100.0%          6     -   5835097   5835125              DQ586319     1    29    29
browser |    29  100.0%          6     +  13134565  13134593              DQ586319     1    29    29
browser |    29  100.0%          6     +  15190344  15190372              DQ586319     1    29    29
browser |    29  100.0%          6     -  15415029  15415057              DQ586319     1    29    29
browser |    29  100.0%          6     -  15725772  15725800              DQ586319     1    29    29
browser |    29  100.0%          6     -  17734884  17734912              DQ586319     1    29    29
browser |    29  100.0%          6     +  18226944  18226972              DQ586319     1    29    29
browser |    29  100.0%          6     +  19940925  19940953              DQ586319     1    29    29
browser |    29  100.0%          6     -  23060460  23060488              DQ586319     1    29    29
browser |    29  100.0%          6     -  24414365  24414393              DQ586319     1    29    29
browser |    29  100.0%          6     -  25585763  25585791              DQ586319     1    29    29
browser |    29  100.0%          6     -  27484316  27484344              DQ586319     1    29    29
browser |    29  100.0%          6     -  27529586  27529614              DQ586319     1    29    29
browser |    29  100.0%          6     +  27654161  27654189              DQ586319     1    29    29
browser |    29  100.0%          6     -  27775195  27775223              DQ586319     1    29    29
browser |    29  100.0%          6     -  27826391  27826419              DQ586319     1    29    29
browser |    29  100.0%          6     +  28502889  28502917              DQ586319     1    29    29
browser |    29  100.0%          6     +  29720034  29720062              DQ586319     1    29    29
browser |    29  100.0%          6     +  29933514  29933542              DQ586319     1    29    29
browser |    29  100.0%          6     -  30498375  30498403              DQ586319     1    29    29
browser |    29  100.0%          6     -  30992783  30992811              DQ586319     1    29    29
browser |    29  100.0%          6     -  31066820  31066848              DQ586319     1    29    29
browser |    29  100.0%          6     +  31245076  31245104              DQ586319     1    29    29
browser |    29  100.0%          6     -  31853498  31853526              DQ586319     1    29    29
browser |    29  100.0%          6     +  32532758  32532786              DQ586319     1    29    29
browser |    29  100.0%          6     +  33525922  33525950              DQ586319     1    29    29
browser |    29  100.0%          6     +  34398900  34398928              DQ586319     1    29    29
browser |    29  100.0%          6     +  35385406  35385434              DQ586319     1    29    29
browser |    29  100.0%          6     +  36942246  36942274              DQ586319     1    29    29
browser |    29  100.0%          6     +  40816334  40816362              DQ586319     1    29    29
browser |    29  100.0%          6     -  77717680  77717708              DQ586319     1    29    29
browser |    29  100.0%          6     -  77726142  77726170              DQ586319     1    29    29
browser |    29  100.0%          6     -  84243975  84244003              DQ586319     1    29    29
browser |    29  100.0%          6     +  85781556  85781584              DQ586319     1    29    29
browser |    29  100.0%          6     +  85839457  85839485              DQ586319     1    29    29
browser |    29  100.0%          6     -  87009276  87009304              DQ586319     1    29    29
browser |    29  100.0%          6     -  87238896  87238924              DQ586319     1    29    29
browser |    29  100.0%          6     -  87735558  87735586              DQ586319     1    29    29
browser |    29  100.0%          6     -  87750586  87750614              DQ586319     1    29    29
browser |    29  100.0%          6     +  88381792  88381820              DQ586319     1    29    29
browser |    29  100.0%          6     +  88948885  88948913              DQ586319     1    29    29
browser |    29  100.0%          6     +  93173569  93173597              DQ586319     1    29    29
browser |    29  100.0%          6     +  99142640  99142668              DQ586319     1    29    29
browser |    29  100.0%          6     +  99429575  99429603              DQ586319     1    29    29
browser |    29  100.0%          6     -  99649745  99649773              DQ586319     1    29    29
browser |    29  100.0%          6     - 105853320 105853348              DQ586319     1    29    29
browser |    29  100.0%          6     + 107935564 107935592              DQ586319     1    29    29
browser |    29  100.0%          6     + 107954240 107954268              DQ586319     1    29    29
browser |    29  100.0%          6     + 108270708 108270736              DQ586319     1    29    29
browser |    29  100.0%          6     + 109047868 109047896              DQ586319     1    29    29
browser |    29  100.0%          6     - 111016898 111016926              DQ586319     1    29    29
browser |    29  100.0%          6     - 111255823 111255851              DQ586319     1    29    29
browser |    29  100.0%          6     + 112048129 112048157              DQ586319     1    29    29
browser |    29  100.0%          6     - 112508552 112508580              DQ586319     1    29    29
browser |    29  100.0%          6     - 112527876 112527904              DQ586319     1    29    29
browser |    29  100.0%          6     + 113932565 113932593              DQ586319     1    29    29
browser |    29  100.0%          6     - 115415036 115415064              DQ586319     1    29    29
browser |    29  100.0%          6     + 117751410 117751438              DQ586319     1    29    29
browser |    29  100.0%          6     - 121729291 121729319              DQ586319     1    29    29
browser |    29  100.0%          6     - 122848001 122848029              DQ586319     1    29    29
browser |    29  100.0%          6     + 125771418 125771446              DQ586319     1    29    29
browser |    29  100.0%          6     + 130803083 130803111              DQ586319     1    29    29
browser |    29  100.0%          6     - 154263460 154263488              DQ586319     1    29    29
browser |    29  100.0%          6     + 154688026 154688054              DQ586319     1    29    29
browser |    29  100.0%          6     - 154965814 154965842              DQ586319     1    29    29
browser |    29  100.0%          6     + 155268722 155268750              DQ586319     1    29    29
browser |    29  100.0%          6     + 156670939 156670967              DQ586319     1    29    29
browser |    29  100.0%          6     + 158127770 158127798              DQ586319     1    29    29
browser |    29  100.0%          6     - 158238642 158238670              DQ586319     1    29    29
browser |    29  100.0%          6     - 158308216 158308244              DQ586319     1    29    29
browser |    29  100.0%          6     - 158348391 158348419              DQ586319     1    29    29
browser |    29  100.0%          6     + 159408061 159408089              DQ586319     1    29    29
browser |    29  100.0%          6     + 159661004 159661032              DQ586319     1    29    29
browser |    29  100.0%          6     - 159795466 159795494              DQ586319     1    29    29
browser |    29  100.0%          6     + 162339911 162339939              DQ586319     1    29    29
browser |    29  100.0%          6     - 164735765 164735793              DQ586319     1    29    29
browser |    29  100.0%          6     - 169347020 169347048              DQ586319     1    29    29
browser |    29  100.0%          6     - 169856146 169856174              DQ586319     1    29    29
browser |    28  100.0%  6_GL000250v2_alt     -   1155107   1155134              DQ586319     1    28    29
browser |    29  100.0%  6_GL000250v2_alt     -   2322290   2322318              DQ586319     1    29    29
browser |    29  100.0%  6_GL000250v2_alt     -   2399391   2399419              DQ586319     1    29    29
browser |    29  100.0%  6_GL000250v2_alt     -   3716647   3716675              DQ586319     1    29    29
browser |    29  100.0%  6_GL000250v2_alt     -   4363842   4363870              DQ586319     1    29    29
browser |    29  100.0%  6_GL000250v2_alt     -   4662266   4662294              DQ586319     1    29    29
browser |    28  100.0%  6_GL000251v2_alt     -   1376781   1376808              DQ586319     1    28    29
browser |    29  100.0%  6_GL000251v2_alt     +   1955495   1955523              DQ586319     1    29    29
browser |    29  100.0%  6_GL000251v2_alt     -   1978120   1978148              DQ586319     1    29    29
browser |    29  100.0%  6_GL000251v2_alt     -   2472370   2472398              DQ586319     1    29    29
browser |    29  100.0%  6_GL000251v2_alt     -   2549198   2549226              DQ586319     1    29    29
browser |    29  100.0%  6_GL000251v2_alt     +   2809659   2809687              DQ586319     1    29    29
browser |    29  100.0%  6_GL000251v2_alt     -   3330737   3330765              DQ586319     1    29    29
browser |    29  100.0%  6_GL000251v2_alt     -   3408905   3408933              DQ586319     1    29    29
browser |    29  100.0%  6_GL000251v2_alt     -   3822509   3822537              DQ586319     1    29    29
browser |    29  100.0%  6_GL000251v2_alt     -   4068075   4068103              DQ586319     1    29    29
browser |    29  100.0%  6_GL000251v2_alt     -   4471277   4471305              DQ586319     1    29    29
browser |    29  100.0%  6_GL000251v2_alt     -   4769093   4769121              DQ586319     1    29    29
browser |    28  100.0%  6_GL000252v2_alt     -   1152586   1152613              DQ586319     1    28    29
browser |    29   96.6%  6_GL000252v2_alt     +   1731595   1731623              DQ586319     1    29    29
browser |    29  100.0%  6_GL000252v2_alt     -   1754217   1754245              DQ586319     1    29    29
browser |    29  100.0%  6_GL000252v2_alt     -   2249094   2249122              DQ586319     1    29    29
browser |    29  100.0%  6_GL000252v2_alt     -   2326192   2326220              DQ586319     1    29    29
browser |    29  100.0%  6_GL000252v2_alt     +   2576809   2576837              DQ586319     1    29    29
browser |    29  100.0%  6_GL000252v2_alt     -   3101276   3101304              DQ586319     1    29    29
browser |    29  100.0%  6_GL000252v2_alt     -   3179257   3179285              DQ586319     1    29    29
browser |    29  100.0%  6_GL000252v2_alt     -   3625511   3625539              DQ586319     1    29    29
browser |    29  100.0%  6_GL000252v2_alt     -   3808801   3808829              DQ586319     1    29    29
browser |    29  100.0%  6_GL000252v2_alt     +   3892487   3892515              DQ586319     1    29    29
browser |    29   96.6%  6_GL000252v2_alt     -   4023560   4023588              DQ586319     1    29    29
browser |    29  100.0%  6_GL000252v2_alt     -   4302696   4302724              DQ586319     1    29    29
browser |    29  100.0%  6_GL000252v2_alt     -   4601122   4601150              DQ586319     1    29    29
browser |    28  100.0%  6_GL000253v2_alt     -   1151808   1151835              DQ586319     1    28    29
browser |    29   96.6%  6_GL000253v2_alt     +   1785994   1786022              DQ586319     1    29    29
browser |    29  100.0%  6_GL000253v2_alt     -   1808610   1808638              DQ586319     1    29    29
browser |    29  100.0%  6_GL000253v2_alt     -   2303127   2303155              DQ586319     1    29    29
browser |    29  100.0%  6_GL000253v2_alt     -   2377327   2377355              DQ586319     1    29    29
browser |    29  100.0%  6_GL000253v2_alt     +   2637887   2637915              DQ586319     1    29    29
browser |    29  100.0%  6_GL000253v2_alt     -   3158536   3158564              DQ586319     1    29    29
browser |    29  100.0%  6_GL000253v2_alt     -   3236688   3236716              DQ586319     1    29    29
browser |    29  100.0%  6_GL000253v2_alt     -   3689389   3689417              DQ586319     1    29    29
browser |    29  100.0%  6_GL000253v2_alt     -   3984385   3984413              DQ586319     1    29    29
browser |    29  100.0%  6_GL000253v2_alt     +   4066885   4066913              DQ586319     1    29    29
browser |    29  100.0%  6_GL000253v2_alt     +   4076269   4076297              DQ586319     1    29    29
browser |    29  100.0%  6_GL000253v2_alt     +   4093717   4093745              DQ586319     1    29    29
browser |    29  100.0%  6_GL000253v2_alt     +   4099021   4099049              DQ586319     1    29    29
browser |    29  100.0%  6_GL000253v2_alt     -   4198148   4198176              DQ586319     1    29    29
browser |    29  100.0%  6_GL000253v2_alt     -   4478507   4478535              DQ586319     1    29    29
browser |    28  100.0%  6_GL000254v2_alt     -   1152223   1152250              DQ586319     1    28    29
browser |    29  100.0%  6_GL000254v2_alt     -   1842431   1842459              DQ586319     1    29    29
browser |    29  100.0%  6_GL000254v2_alt     -   2336925   2336953              DQ586319     1    29    29
browser |    29  100.0%  6_GL000254v2_alt     -   2410936   2410964              DQ586319     1    29    29
browser |    29  100.0%  6_GL000254v2_alt     +   2671444   2671472              DQ586319     1    29    29
browser |    29  100.0%  6_GL000254v2_alt     -   3195390   3195418              DQ586319     1    29    29
browser |    29  100.0%  6_GL000254v2_alt     -   3273563   3273591              DQ586319     1    29    29
browser |    29  100.0%  6_GL000254v2_alt     -   3726175   3726203              DQ586319     1    29    29
browser |    29   96.6%  6_GL000254v2_alt     -   4078190   4078218              DQ586319     1    29    29
browser |    29  100.0%  6_GL000254v2_alt     -   4358227   4358255              DQ586319     1    29    29
browser |    29  100.0%  6_GL000254v2_alt     -   4793550   4793578              DQ586319     1    29    29
browser |    28  100.0%  6_GL000255v2_alt     -   1152243   1152270              DQ586319     1    28    29
browser |    29  100.0%  6_GL000255v2_alt     +   1730858   1730886              DQ586319     1    29    29
browser |    29  100.0%  6_GL000255v2_alt     -   1753483   1753511              DQ586319     1    29    29
browser |    29  100.0%  6_GL000255v2_alt     -   2248159   2248187              DQ586319     1    29    29
browser |    29  100.0%  6_GL000255v2_alt     -   2324807   2324835              DQ586319     1    29    29
browser |    29  100.0%  6_GL000255v2_alt     -   3109332   3109360              DQ586319     1    29    29
browser |    29  100.0%  6_GL000255v2_alt     -   3187452   3187480              DQ586319     1    29    29
browser |    29  100.0%  6_GL000255v2_alt     -   3607449   3607477              DQ586319     1    29    29
browser |    29  100.0%  6_GL000255v2_alt     -   3849039   3849067              DQ586319     1    29    29
browser |    29  100.0%  6_GL000255v2_alt     -   3973097   3973125              DQ586319     1    29    29
browser |    29  100.0%  6_GL000255v2_alt     -   4253442   4253470              DQ586319     1    29    29
browser |    29  100.0%  6_GL000255v2_alt     -   4552036   4552064              DQ586319     1    29    29
browser |    28  100.0%  6_GL000256v2_alt     -   1195197   1195224              DQ586319     1    28    29
browser |    29  100.0%  6_GL000256v2_alt     +   1776537   1776565              DQ586319     1    29    29
browser |    29  100.0%  6_GL000256v2_alt     -   1799151   1799179              DQ586319     1    29    29
browser |    29  100.0%  6_GL000256v2_alt     -   2370265   2370293              DQ586319     1    29    29
browser |    29  100.0%  6_GL000256v2_alt     -   3232716   3232744              DQ586319     1    29    29
browser |    29  100.0%  6_GL000256v2_alt     -   3700347   3700375              DQ586319     1    29    29
browser |    29  100.0%  6_GL000256v2_alt     -   3974574   3974602              DQ586319     1    29    29
browser |    29  100.0%  6_GL000256v2_alt     +   4074145   4074173              DQ586319     1    29    29
browser |    29  100.0%  6_GL000256v2_alt     +   4079449   4079477              DQ586319     1    29    29
browser |    29  100.0%  6_GL000256v2_alt     -   4178951   4178979              DQ586319     1    29    29
browser |    29  100.0%  6_GL000256v2_alt     -   4508183   4508211              DQ586319     1    29    29
browser |    29  100.0%  6_KI270758v1_alt     +     69183     69211              DQ586319     1    29    29
browser |    29  100.0%  6_KI270797v1_alt     -    131348    131376              DQ586319     1    29    29
browser |    29  100.0%  6_KQ090017v1_alt     +     37778     37806              DQ586319     1    29    29
browser |    29   96.6%  6_KV766194v1_fix     +     88711     88739              DQ586319     1    29    29
browser |    29  100.0%          7     +   1039946   1039974              DQ586319     1    29    29
browser |    29  100.0%          7     -   1145695   1145723              DQ586319     1    29    29
browser |    29  100.0%          7     +   2162361   2162389              DQ586319     1    29    29
browser |    29  100.0%          7     +   2269287   2269315              DQ586319     1    29    29
browser |    29  100.0%          7     -   2390140   2390168              DQ586319     1    29    29
browser |    29  100.0%          7     -   2533707   2533735              DQ586319     1    29    29
browser |    29  100.0%          7     -   4389814   4389842              DQ586319     1    29    29
browser |    29  100.0%          7     -   4583161   4583189              DQ586319     1    29    29
browser |    29  100.0%          7     -   4591665   4591693              DQ586319     1    29    29
browser |    29  100.0%          7     -   4600168   4600196              DQ586319     1    29    29
browser |    29  100.0%          7     +   4624674   4624702              DQ586319     1    29    29
browser |    29  100.0%          7     -   6670447   6670475              DQ586319     1    29    29
browser |    29  100.0%          7     -   6974573   6974601              DQ586319     1    29    29
browser |    29  100.0%          7     +   8891059   8891087              DQ586319     1    29    29
browser |    29  100.0%          7     -  10464938  10464966              DQ586319     1    29    29
browser |    29  100.0%          7     +  16197926  16197954              DQ586319     1    29    29
browser |    29  100.0%          7     -  16789267  16789295              DQ586319     1    29    29
browser |    29  100.0%          7     +  20669501  20669529              DQ586319     1    29    29
browser |    29  100.0%          7     +  22801621  22801649              DQ586319     1    29    29
browser |    29  100.0%          7     +  23040060  23040088              DQ586319     1    29    29
browser |    29  100.0%          7     -  23045509  23045537              DQ586319     1    29    29
browser |    29  100.0%          7     +  23638489  23638517              DQ586319     1    29    29
browser |    29  100.0%          7     +  26148832  26148860              DQ586319     1    29    29
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browser |    29  100.0%          7     +  27045910  27045938              DQ586319     1    29    29
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browser |    29  100.0%          X     - 133483424 133483452              DQ586319     1    29    29
browser |    29  100.0%          X     - 134285557 134285585              DQ586319     1    29    29
browser |    29  100.0%          X     + 134840132 134840160              DQ586319     1    29    29
browser |    29  100.0%          X     + 134960926 134960954              DQ586319     1    29    29
browser |    29  100.0%          X     - 136999566 136999594              DQ586319     1    29    29
browser |    29  100.0%          X     - 138282264 138282292              DQ586319     1    29    29
browser |    29  100.0%          X     - 138296517 138296545              DQ586319     1    29    29
browser |    29  100.0%          X     - 145721576 145721604              DQ586319     1    29    29
browser |    29  100.0%          X     - 147991873 147991901              DQ586319     1    29    29
browser |    29  100.0%          X     - 154773516 154773544              DQ586319     1    29    29
browser |    29  100.0%          X     - 155907488 155907516              DQ586319     1    29    29
browser |    29  100.0%          Y     +   1236798   1236826              DQ586319     1    29    29
browser |    29  100.0%          Y     +   4296056   4296084              DQ586319     1    29    29
browser |    29  100.0%          Y     +   6749093   6749121              DQ586319     1    29    29
browser |    29  100.0%          Y     +   7180080   7180108              DQ586319     1    29    29
browser |    29  100.0%          Y     -   8917701   8917729              DQ586319     1    29    29
browser |    29  100.0%          Y     +  12352695  12352723              DQ586319     1    29    29
browser |    27  100.0%          Y     -  12452811  12452837              DQ586319     3    29    29
browser |    29  100.0%          Y     -  12463611  12463639              DQ586319     1    29    29
browser |    29  100.0%          Y     +  12879325  12879353              DQ586319     1    29    29
browser |    29  100.0%          Y     -  13104557  13104585              DQ586319     1    29    29
browser |    26  100.0%          Y     -  14000610  14000635              DQ586319     1    26    29
browser |    26  100.0%          Y     +  14042095  14042120              DQ586319     1    26    29
browser |    29  100.0%          Y     +  19536194  19536222              DQ586319     1    29    29
browser |    29  100.0%          Y     -  22893774  22893802              DQ586319     1    29    29
browser |    29  100.0%          Y     -  24527523  24527551              DQ586319     1    29    29
browser |    29  100.0%          Y     +  25142552  25142580              DQ586319     1    29    29
browser |    29  100.0%          Y     -  57094008  57094036              DQ586319     1    29    29

View details of parts of alignment within browser window
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Go to Human mRNAs track controls

Data last updated: 2019-10-03


p12 Note: Includes annotations on GRCh38.p12 patch sequences

Description

The mRNA track shows alignments between human mRNAs in GenBank and the genome.

Display Conventions and Configuration

This track follows the display conventions for PSL alignment tracks. In dense display mode, the items that are more darkly shaded indicate matches of better quality.

The description page for this track has a filter that can be used to change the display mode, alter the color, and include/exclude a subset of items within the track. This may be helpful when many items are shown in the track display, especially when only some are relevant to the current task.

To use the filter:

  1. Type a term in one or more of the text boxes to filter the mRNA display. For example, to apply the filter to all mRNAs expressed in a specific organ, type the name of the organ in the tissue box. To view the list of valid terms for each text box, consult the table in the Table Browser that corresponds to the factor on which you wish to filter. For example, the "tissue" table contains all the types of tissues that can be entered into the tissue text box. Multiple terms may be entered at once, separated by a space. Wildcards may also be used in the filter.
  2. If filtering on more than one value, choose the desired combination logic. If "and" is selected, only mRNAs that match all filter criteria will be highlighted. If "or" is selected, mRNAs that match any one of the filter criteria will be highlighted.
  3. Choose the color or display characteristic that should be used to highlight or include/exclude the filtered items. If "exclude" is chosen, the browser will not display mRNAs that match the filter criteria. If "include" is selected, the browser will display only those mRNAs that match the filter criteria.

This track may also be configured to display codon coloring, a feature that allows the user to quickly compare mRNAs against the genomic sequence. For more information about this option, go to the Codon and Base Coloring for Alignment Tracks page. Several types of alignment gap may also be colored; for more information, go to the Alignment Insertion/Deletion Display Options page.

Methods

GenBank human mRNAs were aligned against the genome using the blat program. When a single mRNA aligned in multiple places, the alignment having the highest base identity was found. Only alignments having a base identity level within 0.5% of the best and at least 96% base identity with the genomic sequence were kept.

Credits

The mRNA track was produced at UCSC from mRNA sequence data submitted to the international public sequence databases by scientists worldwide.

References

Benson DA, Cavanaugh M, Clark K, Karsch-Mizrachi I, Lipman DJ, Ostell J, Sayers EW. GenBank. Nucleic Acids Res. 2013 Jan;41(Database issue):D36-42. PMID: 23193287; PMC: PMC3531190

Benson DA, Karsch-Mizrachi I, Lipman DJ, Ostell J, Wheeler DL. GenBank: update. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D23-6. PMID: 14681350; PMC: PMC308779

Kent WJ. BLAT - the BLAST-like alignment tool. Genome Res. 2002 Apr;12(4):656-64. PMID: 11932250; PMC: PMC187518