Human Gene ZNF273 (uc003ttk.1)
  Description: Homo sapiens cDNA FLJ40383 fis, clone TESTI2035793.
Transcript (Including UTRs)
   Position: hg19 chr7:64,330,550-64,350,233 Size: 19,684 Total Exon Count: 3 Strand: +


Page IndexSequence and LinksPrimersCTDRNA-Seq ExpressionMicroarray Expression
Other SpeciesmRNA DescriptionsOther NamesModel InformationMethods
Data last updated at UCSC: 2013-06-14

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr7:64,330,550-64,350,233)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTAGene interactionsTable SchemaEnsembl
ExonPrimerH-INVHGNCPubMed

-  Primer design for this transcript
 

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 17.52 RPKM in Skin - Not Sun Exposed (Suprapubic)
Total median expression: 133.94 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  AK097702 - Homo sapiens cDNA FLJ40383 fis, clone TESTI2035793.
JD315323 - Sequence 296347 from Patent EP1572962.
JD252565 - Sequence 233589 from Patent EP1572962.
JD206849 - Sequence 187873 from Patent EP1572962.
JD248132 - Sequence 229156 from Patent EP1572962.
JD547803 - Sequence 528827 from Patent EP1572962.
JD172778 - Sequence 153802 from Patent EP1572962.
JD373040 - Sequence 354064 from Patent EP1572962.
JD162220 - Sequence 143244 from Patent EP1572962.
JD324167 - Sequence 305191 from Patent EP1572962.
JD096901 - Sequence 77925 from Patent EP1572962.
JD049532 - Sequence 30556 from Patent EP1572962.
JD121195 - Sequence 102219 from Patent EP1572962.
JD328303 - Sequence 309327 from Patent EP1572962.
JD434485 - Sequence 415509 from Patent EP1572962.
JD209782 - Sequence 190806 from Patent EP1572962.
JD307889 - Sequence 288913 from Patent EP1572962.
JD336800 - Sequence 317824 from Patent EP1572962.
JD245207 - Sequence 226231 from Patent EP1572962.
JD507979 - Sequence 489003 from Patent EP1572962.
JD191889 - Sequence 172913 from Patent EP1572962.
JD487652 - Sequence 468676 from Patent EP1572962.
JD449909 - Sequence 430933 from Patent EP1572962.
JD464609 - Sequence 445633 from Patent EP1572962.
JD166069 - Sequence 147093 from Patent EP1572962.
JD487835 - Sequence 468859 from Patent EP1572962.
JD240439 - Sequence 221463 from Patent EP1572962.
JD264774 - Sequence 245798 from Patent EP1572962.

-  Other Names for This Gene
  Alternate Gene Symbols: AK097702
UCSC ID: uc003ttk.1
Representative RNA: AK097702

-  Gene Model Information
 
category: noncoding nonsense-mediated-decay: no RNA accession: AK097702.1
exon count: 3CDS single in 3' UTR: no RNA size: 2285
ORF size: 0CDS single in intron: no Alignment % ID: 99.56
txCdsPredict score: 425.00frame shift in genome: no % Coverage: 99.91
has start codon: no stop codon in genome: no # of Alignments: 1
has end codon: no retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.