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Human Gene CIDEA (ENST00000320477.10) from GENCODE V50
  Description: cell death inducing DFFA like effector a, transcript variant 2 (from RefSeq NM_001318383.2)
Gencode Transcript: ENST00000320477.10
Gencode Gene: ENSG00000176194.19
Transcript (Including UTRs)
   Position: hg38 chr18:12,254,361-12,277,595 Size: 23,235 Total Exon Count: 5 Strand: +
Coding Region
   Position: hg38 chr18:12,254,384-12,277,270 Size: 22,887 Coding Exon Count: 5 

Page IndexSequence and LinksUniProtKB CommentsPrimersMalaCardsCTD
RNA-Seq ExpressionMicroarray ExpressionRNA StructureProtein StructureOther SpeciesGO Annotations
mRNA DescriptionsPathwaysOther NamesMethods
Data last updated at UCSC: 2026-07-12 09:30:09

-  Comments and Description Text from UniProtKB
  ID: CIDEA_HUMAN
DESCRIPTION: RecName: Full=Cell death activator CIDE-A; AltName: Full=Cell death-inducing DFFA-like effector A;
FUNCTION: Acts as a CEBPB coactivator in mammary epithelial cells to control the expression of a subset of CEBPB downstream target genes, including ID2, IGF1, PRLR, SOCS1, SOCS3, XDH, but not casein. By interacting with CEBPB, strengthens the association of CEBPB with the XDH promoter, increases histone acetylation and dissociates HDAC1 from the promoter (By similarity). Binds to lipid droplets and regulates their enlargement, thereby restricting lipolysis and favoring storage. At focal contact sites between lipid droplets, promotes directional net neutral lipid transfer from the smaller to larger lipid droplets. The transfer direction may be driven by the internal pressure difference between the contacting lipid droplet pair and occurs at a lower rate than that promoted by CIDEC. When overexpressed, induces apoptosis. The physiological significance of its role in apoptosis is unclear.
SUBUNIT: Directly interacts with CEBPB (By similarity). Interacts with CIDEC.
SUBCELLULAR LOCATION: Lipid droplet. Nucleus (By similarity). Note=Enriched at lipid droplet contact sites. Has been shown to localize to mitonchondria, where it could interact with UCP1 and hence inhibit UCP1 uncoupling activity (By similarity). These data could not be confirmed (PubMed:18509062).
TISSUE SPECIFICITY: Expressed in omental and subcutaneous adipose tissue (at protein level).
DISEASE: Note=In omental and subcutaneous adipose tissue of obese patients matched for BMI, expression levels correlate with insulin sensitivity. Expression is increased 5-6 fold in the group of patients with high insulin sensitivity, compared to the insulin- resistant group. This observation is consistent with the idea that triglyceride storage in adipocytes plays an important role in sequestering triglycerides and fatty acids away from the circulation and peripheral tissues, thus enhancing insulin sensitivity in liver and muscle.
SIMILARITY: Contains 1 CIDE-N domain.

-  Primer design for this transcript
 

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Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  MalaCards Disease Associations
  MalaCards Gene Search: CIDEA
Diseases sorted by gene-association score: obesity (4)

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene
  • D001564 Benzo(a)pyrene
  • D003907 Dexamethasone
  • D013749 Tetrachlorodibenzodioxin
  • C006253 pirinixic acid
  • C504897 12-(3-adamantan-1-ylureido)dodecanoic acid
  • C029141 2,2,5,7,8-pentamethyl-1-hydroxychroman
  • C014024 2,4,5,2',4',5'-hexachlorobiphenyl
  • C023035 3,4,5,3',4'-pentachlorobiphenyl
  • D015124 8-Bromo Cyclic Adenosine Monophosphate
  • D015127 9,10-Dimethyl-1,2-benzanthracene
          more ... click here to view the complete list

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 53.51 RPKM in Adipose - Visceral (Omentum)
Total median expression: 153.26 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
 
Expression ratio colors:

GNF Expression Atlas 2 Data from U133A and GNF1H Chips

      
      
      
     
    
     
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-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -5.2023-0.226 Picture PostScript Text
3' UTR -116.70325-0.359 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR003508 - CAD

Pfam Domains:
PF02017 - CIDE-N domain

Protein Data Bank (PDB) 3-D Structure
MuPIT help
2EEL - NMR MuPIT


ModBase Predicted Comparative 3D Structure on O60543
FrontTopSide
The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
Genome BrowserGenome BrowserGenome BrowserGenome BrowserNo orthologNo ortholog
Gene Details     
Gene Sorter     
MGIRGDEnsemblEnsembl  
Protein SequenceProtein SequenceProtein SequenceProtein Sequence  
AlignmentAlignmentAlignmentAlignment  

-  Gene Ontology (GO) Annotations with Structured Vocabulary
  Molecular Function:
GO:0042803 protein homodimerization activity

Biological Process:
GO:0001659 temperature homeostasis
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
GO:0006629 lipid metabolic process
GO:0006915 apoptotic process
GO:0008219 cell death
GO:0010890 positive regulation of sequestering of triglyceride
GO:0019915 lipid storage
GO:0030512 negative regulation of transforming growth factor beta receptor signaling pathway
GO:0032720 negative regulation of tumor necrosis factor production
GO:0034389 lipid particle organization
GO:0035634 response to stilbenoid
GO:0042981 regulation of apoptotic process
GO:0050710 negative regulation of cytokine secretion
GO:0050995 negative regulation of lipid catabolic process
GO:1900118 negative regulation of execution phase of apoptosis
GO:1902510 regulation of apoptotic DNA fragmentation

Cellular Component:
GO:0005622 intracellular
GO:0005634 nucleus
GO:0005737 cytoplasm
GO:0005739 mitochondrion
GO:0005740 mitochondrial envelope
GO:0005811 lipid particle
GO:0005829 cytosol


-  Descriptions from all associated GenBank mRNAs
  KJ900828 - Synthetic construct Homo sapiens clone ccsbBroadEn_10222 CIDEA gene, encodes complete protein.
KR710637 - Synthetic construct Homo sapiens clone CCSBHm_00014939 CIDEA (CIDEA) mRNA, encodes complete protein.
LF385402 - JP 2014500723-A/192905: Polycomb-Associated Non-Coding RNAs.
MA620979 - JP 2018138019-A/192905: Polycomb-Associated Non-Coding RNAs.
AK122762 - Homo sapiens cDNA FLJ16297 fis, clone PERIC2001379, highly similar to Cell death activator CIDE-A.
AF041378 - Homo sapiens cell death activator CIDE-A (CIDE-A) mRNA, complete cds.
AY364639 - Homo sapiens cell death activator (CIDEA) mRNA, complete cds.
BC031896 - Homo sapiens cell death-inducing DFFA-like effector a, mRNA (cDNA clone MGC:30089 IMAGE:4776542), complete cds.

-  Biochemical and Signaling Pathways
  Reactome (by CSHL, EBI, and GO)

Protein O60543 (Reactome details) participates in the following event(s):

R-HSA-8856630 CIDEA:CIDEC binds lipid droplets
R-HSA-8964572 Lipid particle organization
R-HSA-556833 Metabolism of lipids
R-HSA-1430728 Metabolism

-  Other Names for This Gene
  Alternate Gene Symbols: B0YIY7, CIDEA , CIDEA_HUMAN, ENST00000320477.1, ENST00000320477.2, ENST00000320477.3, ENST00000320477.4, ENST00000320477.5, ENST00000320477.6, ENST00000320477.7, ENST00000320477.8, ENST00000320477.9, NM_001318383, O60543, Q6UPR7, uc002kqt.1, uc002kqt.2, uc002kqt.3, uc002kqt.4, uc002kqt.5, uc002kqt.6
UCSC ID: ENST00000320477.10
RefSeq Accession: NM_001279.4
Protein: O60543 (aka CIDEA_HUMAN or CIDA_HUMAN)
CCDS: CCDS11856.1

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.