Mouse Gene Eif4g3 (ENSMUST00000105831.8) Description and Page Index
  Description: Eif4g3 (from geneSymbol)
Gencode Transcript: ENSMUST00000105831.8
Gencode Gene: ENSMUSG00000028760.16
Transcript (Including UTRs)
   Position: mm10 chr4:137,993,456-138,207,079 Size: 213,624 Total Exon Count: 36 Strand: +
Coding Region
   Position: mm10 chr4:138,082,959-138,206,154 Size: 123,196 Coding Exon Count: 32 

Page IndexSequence and LinksCTDRNA StructureOther SpeciesmRNA Descriptions
PathwaysOther NamesModel InformationMethods
Data last updated: 2019-09-19

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr4:137,993,456-138,207,079)mRNA (may differ from genome)Protein (1567 aa)
Gene SorterGenome BrowserOther Species FASTAVisiGeneTable SchemaBioGPS
CGAPEnsemblExonPrimerGeneCardsPubMedStanford SOURCE
UniProtKBWikipedia

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene           more ... click here to view the complete list

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -240.40606-0.397 Picture PostScript Text
3' UTR -170.26925-0.184 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
HumanRatZebrafishD. melanogasterC. elegansS. cerevisiae
Genome BrowserGenome BrowserNo orthologNo orthologNo orthologNo ortholog
Gene Details     
Gene Sorter     
GenBankRGD    
Protein SequenceProtein Sequence    
AlignmentAlignment    

-  Descriptions from all associated GenBank mRNAs
  AK019693 - Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930523M17 product:similar to EIF4GII [Homo sapiens], full insert sequence.
AK054068 - Mus musculus 2 days pregnant adult female oviduct cDNA, RIKEN full-length enriched library, clone:E230016B04 product:EIF4GII homolog [Homo sapiens], full insert sequence.
BC072600 - Mus musculus eukaryotic translation initiation factor 4 gamma, 3, mRNA (cDNA clone MGC:99864 IMAGE:6410320), complete cds.
AK046639 - Mus musculus 4 days neonate male adipose cDNA, RIKEN full-length enriched library, clone:B430215E05 product:hypothetical protein, full insert sequence.
BC082549 - Mus musculus eukaryotic translation initiation factor 4 gamma, 3, mRNA (cDNA clone IMAGE:6856339).
BC079885 - Mus musculus eukaryotic translation initiation factor 4 gamma, 3, mRNA (cDNA clone IMAGE:6853600).
AK050887 - Mus musculus 9 days embryo whole body cDNA, RIKEN full-length enriched library, clone:D030030A06 product:inferred: eIF4GII {Homo sapiens}, full insert sequence.
BC047531 - Mus musculus eukaryotic translation initiation factor 4 gamma, 3, mRNA (cDNA clone IMAGE:4988206), partial cds.
BC024456 - Mus musculus eukaryotic translation initiation factor 4 gamma, 3, mRNA (cDNA clone IMAGE:4975180), partial cds.
EF410093 - Mus musculus Accn1/Eif4g3 trans-spliced mRNA sequence.
BC075705 - Mus musculus eukaryotic translation initiation factor 4 gamma, 3, mRNA (cDNA clone IMAGE:3489382), partial cds.
AK029440 - Mus musculus 0 day neonate head cDNA, RIKEN full-length enriched library, clone:4833436O05 product:TRANSLATION INITIATIONFACTOR EIF-4GAMMA (FRAGMENT) homolog [Homo sapiens], full insert sequence.
BC057913 - Mus musculus eukaryotic translation initiation factor 4 gamma, 3, mRNA (cDNA clone IMAGE:5044656), partial cds.
AK133389 - Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4933406I01 product:eukaryotic translation initiation factor 4 gamma, 3, full insert sequence.
BC048848 - Mus musculus eukaryotic translation initiation factor 4 gamma, 3, mRNA (cDNA clone IMAGE:5049617), partial cds.
BC022766 - Mus musculus eukaryotic translation initiation factor 4 gamma, 3, mRNA (cDNA clone IMAGE:5003063), with apparent retained intron.
AK137712 - Mus musculus adult female vagina cDNA, RIKEN full-length enriched library, clone:9930106D06 product:eukaryotic translation initiation factor 4 gamma, 3, full insert sequence.
DQ710162 - Mus musculus piRNA piR-125484, complete sequence.
AK005120 - Mus musculus adult male cerebellum cDNA, RIKEN full-length enriched library, clone:1500002J22 product:unclassifiable, full insert sequence.

-  Biochemical and Signaling Pathways
  KEGG - Kyoto Encyclopedia of Genes and Genomes
mmu03013 - RNA transport
mmu05416 - Viral myocarditis

BioCarta from NCI Cancer Genome Anatomy Project
m_mTORPathway - mTOR Signaling Pathway
m_iresPathway - Internal Ribosome entry pathway

-  Other Names for This Gene
  Alternate Gene Symbols: BC079885, uc290rbr.1, Z4YKC4
UCSC ID: uc290rbr.1
RefSeq Accession: NM_001256195
CCDS: CCDS38926.1

-  Gene Model Information
  Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.