Mouse Gene Macf1 (ENSMUST00000238555.1) Description and Page Index
  Description: Macf1 (from geneSymbol)
Gencode Transcript: ENSMUST00000238555.1
Gencode Gene: ENSMUSG00000028649.20
Transcript (Including UTRs)
   Position: mm10 chr4:123,349,716-123,573,060 Size: 223,345 Total Exon Count: 94 Strand: -
Coding Region
   Position: mm10 chr4:123,350,889-123,572,725 Size: 221,837 Coding Exon Count: 94 

Page IndexSequence and LinksCTDRNA StructureOther SpeciesmRNA Descriptions
Other NamesModel InformationMethods
Data last updated: 2019-09-19

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr4:123,349,716-123,573,060)mRNA (may differ from genome)Protein (5323 aa)
Gene SorterGenome BrowserOther Species FASTAVisiGeneTable SchemaBioGPS
CGAPEnsemblExonPrimerGeneCardsPubMedStanford SOURCE
Wikipedia

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene           more ... click here to view the complete list

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -117.00335-0.349 Picture PostScript Text
3' UTR -290.001173-0.247 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
HumanRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologGenome BrowserNo orthologNo orthologNo orthologNo ortholog
      
      
 RGD    
 Protein Sequence    
 Alignment    

-  Descriptions from all associated GenBank mRNAs
  BC052520 - Mus musculus microtubule-actin crosslinking factor 1, mRNA (cDNA clone IMAGE:1530992), with apparent retained intron.
AF150755 - Mus musculus microtubule-actin crosslinking factor (Macf) mRNA, complete cds.
DQ067088 - Mus musculus microtubule-actin crosslinking factor 1b mRNA, complete cds.
AK220378 - Mus musculus mRNA for mKIAA1251 protein.
U67205 - Mus musculus ACF7 neural isoform 3 (mACF7) mRNA, partial cds.
U67203 - Mus musculus ACF7 neural isoform 1 (mACF7) mRNA, partial cds.
U67204 - Mus musculus ACF7 neural isoform 2 (mACF7) mRNA, partial cds.
AK143540 - Mus musculus 12 days embryo whole body cDNA, RIKEN full-length enriched library, clone:E970019C21 product:microtubule-actin crosslinking factor 1, full insert sequence.
AK017708 - Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730484H24 product:actin-crosslinking protein 7, full insert sequence.
BC043319 - Mus musculus microtubule-actin crosslinking factor 1, mRNA (cDNA clone IMAGE:5356775), partial cds.
AK122291 - Mus musculus mRNA for mKIAA0465 protein.
BC098194 - Mus musculus microtubule-actin crosslinking factor 1, mRNA (cDNA clone IMAGE:6817067), partial cds.
AK164953 - Mus musculus 0 day neonate lung cDNA, RIKEN full-length enriched library, clone:E030050K20 product:microtubule-actin crosslinking factor 1, full insert sequence.
AK149066 - Mus musculus 2 days neonate sympathetic ganglion cDNA, RIKEN full-length enriched library, clone:7120480M12 product:microtubule-actin crosslinking factor 1, full insert sequence.
AK162442 - Mus musculus 12 days embryo embryonic body between diaphragm region and neck cDNA, RIKEN full-length enriched library, clone:9430040J03 product:microtubule-actin crosslinking factor 1, full insert sequence.
AK044769 - Mus musculus adult retina cDNA, RIKEN full-length enriched library, clone:A930041F10 product:actin-crosslinking protein 7, full insert sequence.
BC026707 - Mus musculus microtubule-actin crosslinking factor 1, mRNA (cDNA clone IMAGE:5363352).
AK089453 - Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F730032J06 product:hypothetical Calponin-like actin-binding/Calponin homology domain profile/Actin-binding, actinin-type containing protein, full insert sequence.

-  Other Names for This Gene
  Alternate Gene Symbols: AF150755, uc294izw.1
UCSC ID: uc294izw.1
RefSeq Accession: NM_001199137
CCDS: CCDS57294.1

-  Gene Model Information
  Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.