Human Gene LINC00174 (ENST00000421767.1) Description and Page Index
  Description: Homo sapiens long intergenic non-protein coding RNA 174 (LINC00174), long non-coding RNA. (from RefSeq NR_026873)
Gencode Transcript: ENST00000421767.1
Gencode Gene: ENSG00000179406.8
Transcript (Including UTRs)
   Position: hg38 chr7:66,376,044-66,401,338 Size: 25,295 Total Exon Count: 7 Strand: -


Page IndexSequence and LinksCTDRNA-Seq ExpressionMicroarray ExpressionOther Species
mRNA DescriptionsOther NamesMethods
Data last updated: 2019-09-04

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr7:66,376,044-66,401,338)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTAGene interactionsTable SchemaBioGPS
CGAPEnsemblEntrez GeneExonPrimerHGNCLynx
PubMedStanford SOURCE

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 22.01 RPKM in Testis
Total median expression: 181.31 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  AK092625 - Homo sapiens cDNA FLJ35306 fis, clone PROST2009784.
AX747635 - Sequence 1160 from Patent EP1308459.
AK091213 - Homo sapiens cDNA FLJ33894 fis, clone CTONG2007776, weakly similar to SYNAPSIN I.
AX746853 - Sequence 378 from Patent EP1308459.
AK124597 - Homo sapiens cDNA FLJ42606 fis, clone BRACE3012364.
JD431739 - Sequence 412763 from Patent EP1572962.
JD410027 - Sequence 391051 from Patent EP1572962.
JD057235 - Sequence 38259 from Patent EP1572962.
JD100486 - Sequence 81510 from Patent EP1572962.
JD528617 - Sequence 509641 from Patent EP1572962.
JD228864 - Sequence 209888 from Patent EP1572962.
JD296136 - Sequence 277160 from Patent EP1572962.
JD191693 - Sequence 172717 from Patent EP1572962.
JD110310 - Sequence 91334 from Patent EP1572962.
JD134281 - Sequence 115305 from Patent EP1572962.
JD142902 - Sequence 123926 from Patent EP1572962.
JD460040 - Sequence 441064 from Patent EP1572962.
JD458956 - Sequence 439980 from Patent EP1572962.
JD193149 - Sequence 174173 from Patent EP1572962.
JD523268 - Sequence 504292 from Patent EP1572962.
JD460444 - Sequence 441468 from Patent EP1572962.
JD142484 - Sequence 123508 from Patent EP1572962.
JD118870 - Sequence 99894 from Patent EP1572962.
JD118871 - Sequence 99895 from Patent EP1572962.
JD283313 - Sequence 264337 from Patent EP1572962.
BC093655 - Homo sapiens non-protein coding RNA 174, mRNA (cDNA clone IMAGE:7939500).
BC093657 - Homo sapiens non-protein coding RNA 174, mRNA (cDNA clone IMAGE:7939502).
JD294407 - Sequence 275431 from Patent EP1572962.
KJ904164 - Synthetic construct Homo sapiens clone ccsbBroadEn_13558 LINC00174 gene, encodes complete protein.
BC020399 - Homo sapiens hypothetical LOC285908, mRNA (cDNA clone IMAGE:4339355).
DQ584968 - Homo sapiens piRNA piR-52080, complete sequence.
JD119147 - Sequence 100171 from Patent EP1572962.
JD448067 - Sequence 429091 from Patent EP1572962.
DQ576412 - Homo sapiens piRNA piR-44524, complete sequence.
DQ584985 - Homo sapiens piRNA piR-52097, complete sequence.
JD247289 - Sequence 228313 from Patent EP1572962.
JD173357 - Sequence 154381 from Patent EP1572962.
JD242331 - Sequence 223355 from Patent EP1572962.
JD524092 - Sequence 505116 from Patent EP1572962.
JD536536 - Sequence 517560 from Patent EP1572962.
JD240472 - Sequence 221496 from Patent EP1572962.
JD110267 - Sequence 91291 from Patent EP1572962.
JD326104 - Sequence 307128 from Patent EP1572962.
JD397738 - Sequence 378762 from Patent EP1572962.
JD555430 - Sequence 536454 from Patent EP1572962.
JD555504 - Sequence 536528 from Patent EP1572962.
JD149649 - Sequence 130673 from Patent EP1572962.
JD290011 - Sequence 271035 from Patent EP1572962.
JD398135 - Sequence 379159 from Patent EP1572962.
JD201080 - Sequence 182104 from Patent EP1572962.
JD521184 - Sequence 502208 from Patent EP1572962.
JD563406 - Sequence 544430 from Patent EP1572962.
JD512009 - Sequence 493033 from Patent EP1572962.
JD352653 - Sequence 333677 from Patent EP1572962.
JD258162 - Sequence 239186 from Patent EP1572962.
JD338142 - Sequence 319166 from Patent EP1572962.
JD387793 - Sequence 368817 from Patent EP1572962.
JD308462 - Sequence 289486 from Patent EP1572962.
JD559143 - Sequence 540167 from Patent EP1572962.
JD255104 - Sequence 236128 from Patent EP1572962.
JD094675 - Sequence 75699 from Patent EP1572962.
JD232626 - Sequence 213650 from Patent EP1572962.
JD187368 - Sequence 168392 from Patent EP1572962.
JD161723 - Sequence 142747 from Patent EP1572962.
JD173101 - Sequence 154125 from Patent EP1572962.
JD537739 - Sequence 518763 from Patent EP1572962.
JD444266 - Sequence 425290 from Patent EP1572962.
JD518705 - Sequence 499729 from Patent EP1572962.
DQ584955 - Homo sapiens piRNA piR-52067, complete sequence.
JC506824 - Sequence 192 from Patent EP2733220.
JC737936 - Sequence 192 from Patent WO2014075939.
DQ581766 - Homo sapiens piRNA piR-49878, complete sequence.
DQ579678 - Homo sapiens piRNA piR-47790, complete sequence.

-  Other Names for This Gene
  Alternate Gene Symbols: NR_026873, uc003tux.1, uc003tux.2, uc003tux.3, uc003tux.4, uc003tux.5
UCSC ID: uc003tux.5
RefSeq Accession: NR_026873

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.