Description: The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. (from UniProt C9JA41) Gencode Transcript: ENST00000444627.5 Gencode Gene: ENSG00000164659.15 Transcript (Including UTRs) Position: hg38 chr7:86,879,939-87,059,631 Size: 179,693 Total Exon Count: 22 Strand: - Coding Region Position: hg38 chr7:86,880,471-87,059,513 Size: 179,043 Coding Exon Count: 22
ID:C9JA41_HUMAN DESCRIPTION: SubName: Full=UPF0577 protein KIAA1324-like; CAUTION: The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.
RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
Highest median expression: 7.88 RPKM in Brain - Spinal cord (cervical c-1)
Total median expression: 131.41 RPKM
The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
ModBase Predicted Comparative 3D Structure on C9JA41
The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.
Orthologous Genes in Other Species
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.