Human Gene SNHG29 (ENST00000487066.6) from GENCODE V41
  Description: Homo sapiens small nucleolar RNA host gene 29 (SNHG29), transcript variant 12, long non-coding RNA. (from RefSeq NR_027168)
Gencode Transcript: ENST00000487066.6
Gencode Gene: ENSG00000175061.20
Transcript (Including UTRs)
   Position: hg38 chr17:16,438,975-16,442,018 Size: 3,044 Total Exon Count: 6 Strand: +


Page IndexSequence and LinksRNA-Seq ExpressionMicroarray ExpressionOther SpeciesmRNA Descriptions
Other NamesMethods
Data last updated at UCSC: 2022-05-14 09:57:26

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr17:16,438,975-16,442,018)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTATable SchemaBioGPSEnsembl
Entrez GeneExonPrimerGencodePubMed

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 166.88 RPKM in Cells - Cultured fibroblasts
Total median expression: 3476.06 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  AK307982 - Homo sapiens cDNA, FLJ97930.
AK098643 - Homo sapiens cDNA FLJ25777 fis, clone TST06567.
AK309961 - Homo sapiens cDNA, FLJ17003.
BX538291 - Homo sapiens mRNA; cDNA DKFZp686I23148 (from clone DKFZp686I23148).
AK308482 - Homo sapiens cDNA, FLJ98523.
AK311247 - Homo sapiens cDNA, FLJ18289.
BC027986 - Homo sapiens chromosome 17 open reading frame 45, mRNA (cDNA clone MGC:40157 IMAGE:4940349), complete cds.
BC040159 - Homo sapiens chromosome 17 open reading frame 45, mRNA (cDNA clone MGC:48957 IMAGE:5539041), complete cds.
HQ447236 - Synthetic construct Homo sapiens clone IMAGE:100070541; CCSB009528_03 chromosome 17 open reading frame 45 (C17orf45) gene, encodes complete protein.
KJ900896 - Synthetic construct Homo sapiens clone ccsbBroadEn_10290 C17orf76-AS1 gene, encodes complete protein.
BC019833 - Homo sapiens chromosome 17 open reading frame 45, mRNA (cDNA clone IMAGE:4154219), partial cds.
BC012396 - Homo sapiens chromosome 17 open reading frame 45, mRNA (cDNA clone IMAGE:3880785), partial cds.
JD023192 - Sequence 4216 from Patent EP1572962.
JD029469 - Sequence 10493 from Patent EP1572962.
DQ595276 - Homo sapiens piRNA piR-61388, complete sequence.
JD022373 - Sequence 3397 from Patent EP1572962.
JD023780 - Sequence 4804 from Patent EP1572962.
JD034489 - Sequence 15513 from Patent EP1572962.
JD158572 - Sequence 139596 from Patent EP1572962.
JD020539 - Sequence 1563 from Patent EP1572962.
JD021308 - Sequence 2332 from Patent EP1572962.
JD034877 - Sequence 15901 from Patent EP1572962.
JD113922 - Sequence 94946 from Patent EP1572962.
AJ012499 - Homo sapiens mRNA activated in tumor suppression, clone TSAP19.
JD564277 - Sequence 545301 from Patent EP1572962.
JD431957 - Sequence 412981 from Patent EP1572962.
JD273156 - Sequence 254180 from Patent EP1572962.
JD466987 - Sequence 448011 from Patent EP1572962.
JD160639 - Sequence 141663 from Patent EP1572962.
JD233283 - Sequence 214307 from Patent EP1572962.
JD131362 - Sequence 112386 from Patent EP1572962.
JD057633 - Sequence 38657 from Patent EP1572962.
JD457546 - Sequence 438570 from Patent EP1572962.
JD388984 - Sequence 370008 from Patent EP1572962.
JD108112 - Sequence 89136 from Patent EP1572962.
JD480466 - Sequence 461490 from Patent EP1572962.
JD466752 - Sequence 447776 from Patent EP1572962.
JD425938 - Sequence 406962 from Patent EP1572962.
JD213483 - Sequence 194507 from Patent EP1572962.
JD463399 - Sequence 444423 from Patent EP1572962.
JD333374 - Sequence 314398 from Patent EP1572962.
JD545914 - Sequence 526938 from Patent EP1572962.
JD487705 - Sequence 468729 from Patent EP1572962.
JD280694 - Sequence 261718 from Patent EP1572962.
JD225479 - Sequence 206503 from Patent EP1572962.
JD202325 - Sequence 183349 from Patent EP1572962.

-  Other Names for This Gene
  Alternate Gene Symbols: ENST00000487066.1, ENST00000487066.2, ENST00000487066.3, ENST00000487066.4, ENST00000487066.5, NR_027168, uc021tqy.1, uc021tqy.2, uc021tqy.3
UCSC ID: ENST00000487066.6
RefSeq Accession: NR_027168

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.