Human Gene LINC00678 (ENST00000534757.1) Description and Page Index
  Description: long intergenic non-protein coding RNA 678 (from HGNC LINC00678)
Gencode Transcript: ENST00000534757.1
Gencode Gene: ENSG00000254934.5
Transcript (Including UTRs)
   Position: hg38 chr11:27,617,993-27,634,627 Size: 16,635 Total Exon Count: 4 Strand: -


Page IndexSequence and LinksRNA-Seq ExpressionOther SpeciesmRNA DescriptionsOther Names
Methods
Data last updated: 2019-09-04

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr11:27,617,993-27,634,627)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTAGene interactionsTable SchemaBioGPS
EnsemblExonPrimerHGNCLynxPubMedStanford SOURCE

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 0.03 RPKM in Testis
Total median expression: 0.05 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  JD367658 - Sequence 348682 from Patent EP1572962.
JD262144 - Sequence 243168 from Patent EP1572962.
JD087137 - Sequence 68161 from Patent EP1572962.
EF565102 - Homo sapiens chromosome 11 isolate HA_003216 mRNA sequence.
JD121726 - Sequence 102750 from Patent EP1572962.

-  Other Names for This Gene
  Alternate Gene Symbols: EF565102, uc057zyk.1
UCSC ID: uc057zyk.1
RefSeq Accession: NR_102708

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.