Human Gene SNHG29 (ENST00000583400.7) from GENCODE V41
  Description: Homo sapiens small nucleolar RNA host gene 29 (SNHG29), transcript variant 22, long non-coding RNA. (from RefSeq NR_027178)
Gencode Transcript: ENST00000583400.7
Gencode Gene: ENSG00000175061.20
Transcript (Including UTRs)
   Position: hg38 chr17:16,439,005-16,473,081 Size: 34,077 Total Exon Count: 7 Strand: +


Page IndexSequence and LinksRNA-Seq ExpressionMicroarray ExpressionOther SpeciesmRNA Descriptions
Other NamesMethods
Data last updated at UCSC: 2022-05-14 09:57:26

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr17:16,439,005-16,473,081)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTATable SchemaBioGPSEnsembl
Entrez GeneExonPrimerGencodePubMed

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 166.88 RPKM in Cells - Cultured fibroblasts
Total median expression: 3476.06 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  AK307982 - Homo sapiens cDNA, FLJ97930.
AK098643 - Homo sapiens cDNA FLJ25777 fis, clone TST06567.
AK309961 - Homo sapiens cDNA, FLJ17003.
BX538291 - Homo sapiens mRNA; cDNA DKFZp686I23148 (from clone DKFZp686I23148).
AK308482 - Homo sapiens cDNA, FLJ98523.
AK311247 - Homo sapiens cDNA, FLJ18289.
BC027986 - Homo sapiens chromosome 17 open reading frame 45, mRNA (cDNA clone MGC:40157 IMAGE:4940349), complete cds.
BC040159 - Homo sapiens chromosome 17 open reading frame 45, mRNA (cDNA clone MGC:48957 IMAGE:5539041), complete cds.
HQ447236 - Synthetic construct Homo sapiens clone IMAGE:100070541; CCSB009528_03 chromosome 17 open reading frame 45 (C17orf45) gene, encodes complete protein.
KJ900896 - Synthetic construct Homo sapiens clone ccsbBroadEn_10290 C17orf76-AS1 gene, encodes complete protein.
BC019833 - Homo sapiens chromosome 17 open reading frame 45, mRNA (cDNA clone IMAGE:4154219), partial cds.
BC012396 - Homo sapiens chromosome 17 open reading frame 45, mRNA (cDNA clone IMAGE:3880785), partial cds.
DQ595276 - Homo sapiens piRNA piR-61388, complete sequence.
JD022373 - Sequence 3397 from Patent EP1572962.
JD023780 - Sequence 4804 from Patent EP1572962.
JD034489 - Sequence 15513 from Patent EP1572962.
JD158572 - Sequence 139596 from Patent EP1572962.

-  Other Names for This Gene
  Alternate Gene Symbols: ENST00000583400.1, ENST00000583400.2, ENST00000583400.3, ENST00000583400.4, ENST00000583400.5, ENST00000583400.6, NR_027178, uc010vwp.1, uc010vwp.2, uc010vwp.3
UCSC ID: ENST00000583400.7
RefSeq Accession: NR_027178

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.