Human Gene SPAG11A (ENST00000642566.1)
Description: sperm associated antigen 11A (from HGNC SPAG11A)
Gencode Transcript: ENST00000642566.1
Gencode Gene: ENSG00000178287.18
Transcript (Including UTRs)
Position: hg38 chr8:7,847,896-7,860,930 Size: 13,035 Total Exon Count: 3 Strand: +
Position: hg38 chr8:7,848,047-7,860,833 Size: 12,787 Coding Exon Count: 3
Data last updated at UCSC: 2021-01-14 15:32:12
Sequence and Links to Tools and Databases
Comparative Toxicogenomics Database (CTD)
The following chemicals interact with this gene
RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
Microarray Expression Data
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mRNA Secondary Structure of 3' and 5' UTRs
The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
Orthologous Genes in Other Species
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Descriptions from all associated GenBank mRNAs
AJ635328 - Homo sapiens partial mRNA for human epididymal protein 2 (HE2C gene), isoform C. AF168617 - Homo sapiens HE2 beta1 mRNA, complete cds. JD062832 - Sequence 43856 from Patent EP1572962. JD492921 - Sequence 473945 from Patent EP1572962. BC125141 - Homo sapiens sperm associated antigen 11B, mRNA (cDNA clone IMAGE:40119847). JD140462 - Sequence 121486 from Patent EP1572962. JD361007 - Sequence 342031 from Patent EP1572962. BC058833 - Homo sapiens sperm associated antigen 11A, mRNA (cDNA clone MGC:61846 IMAGE:6615920), complete cds. X67697 - H.sapiens HE2 mRNA. AF168618 - Homo sapiens HE2 beta2 mRNA, complete cds. AF168619 - Homo sapiens HE2 gamma1 mRNA, complete cds. KJ904340 - Synthetic construct Homo sapiens clone ccsbBroadEn_13734 SPAG11A gene, encodes complete protein. AJ628017 - Homo sapiens partial mRNA for human epididymal protein 2 (HE2 gene), isoform C. AF168620 - Homo sapiens HE2 gamma2 mRNA, partial cds. AF170797 - Homo sapiens HE2 alpha2 mRNA, partial cds. JD349641 - Sequence 330665 from Patent EP1572962. JD475165 - Sequence 456189 from Patent EP1572962. JD349443 - Sequence 330467 from Patent EP1572962. JD345840 - Sequence 326864 from Patent EP1572962.
Other Names for This Gene
Alternate Gene Symbols: A0A2R8Y853, AF168617, uc286ajt.1 UCSC ID: ENST00000642566.1 RefSeq Accession: NM_001363726
Methods, Credits, and Use Restrictions
for details on how this gene model was made and data restrictions if any.