Mouse Gene Dolpp1 (uc008jci.1) Description and Page Index
Description: dolichyldiphosphatase 1
Transcript (Including UTRs)
Position: mm9 chr2:30,247,936-30,256,047 Size: 8,112 Total Exon Count: 8 Strand: +
Position: mm9 chr2:30,247,957-30,254,698 Size: 6,742 Coding Exon Count: 8
Data last updated: 2011-03-02
Sequence and Links to Tools and Databases
Comparative Toxicogenomics Database (CTD)
Microarray Expression Data
mRNA Secondary Structure of 3' and 5' UTRs
The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
Protein Domain and Structure Information
InterPro Domains: Graphical view of domain structure IPR016118 - P_Acid_Pase/Cl_peroxidase_N
IPR000326 - P_Acid_Pase_2/haloperoxidase
Pfam Domains: PF01569 - PAP2 superfamily
SCOP Domains: 48317 - Acid phosphatase/Vanadium-dependent haloperoxidase
ModBase Predicted Comparative 3D Structure on A2AWJ4
The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.
Orthologous Genes in Other Species
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Descriptions from all associated GenBank mRNAs
AK088065 - Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430003B06 product:RIKEN cDNA 0610011H20 gene, full insert sequence. AK044141 - Mus musculus 10 days neonate cortex cDNA, RIKEN full-length enriched library, clone:A830094I04 product:hypothetical RELATED CAX4 COMPLETE CDS PRECURSOR THIOESTERASE PALMITOYL-PROTEIN MRNA CLONE:2-23 containing protein, full insert sequence. AB030189 - Mus musculus mRNA, complete cds, clone:2-23. AK002544 - Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:0610011H20 product:LSFR2 PROTEIN (FRAGMENT) homolog [Fugu rubripes], full insert sequence. AK053923 - Mus musculus 2 days pregnant adult female oviduct cDNA, RIKEN full-length enriched library, clone:E230001J18 product:RIKEN cDNA 0610011H20 gene, full insert sequence. BC026544 - Mus musculus dolichyl pyrophosphate phosphatase 1, mRNA (cDNA clone MGC:35893 IMAGE:4975127), complete cds. AK010797 - Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410136N23 product:LSFR2 PROTEIN (FRAGMENT) homolog [Fugu rubripes], full insert sequence. AK183383 - Mus musculus cDNA, clone:Y0G0125L05, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000028209, based on BLAT search. LF259635 - JP 2014500723-A/67138: Polycomb-Associated Non-Coding RNAs. LF259636 - JP 2014500723-A/67139: Polycomb-Associated Non-Coding RNAs. LF193237 - JP 2014500723-A/740: Polycomb-Associated Non-Coding RNAs. MA428814 - JP 2018138019-A/740: Polycomb-Associated Non-Coding RNAs. MA495212 - JP 2018138019-A/67138: Polycomb-Associated Non-Coding RNAs. MA495213 - JP 2018138019-A/67139: Polycomb-Associated Non-Coding RNAs.
Biochemical and Signaling Pathways
KEGG - Kyoto Encyclopedia of Genes and Genomes mmu00510 - N-Glycan biosynthesis
Other Names for This Gene
Alternate Gene Symbols: A2AWJ4, A2AWJ4_MOUSE, mCG_18292, NM_020329, NP_065062, RP23-395P6.7-001 UCSC ID: uc008jci.1 RefSeq Accession: NM_020329
A2AWJ4 CCDS: CCDS15881.1
Gene Model Information
8 CDS single in 3' UTR:
717 CDS single in intron:
Alignment % ID:
1634.00 frame shift in genome:
has start codon:
stop codon in genome:
# of Alignments:
has end codon:
# AT/AC introns
end bleed into intron:
0 # strange splices:
for a detailed description of the fields of the table above.
Methods, Credits, and Use Restrictions
for details on how this gene model was made and data restrictions if any.