D. melanogaster Gene CG6432 (CG6432-RA) Description and Page Index
  Description: CG6432-PA (EC 6.2.1.1) (GH15945p).
Transcript (Including UTRs)
   Position: dm3 chr3R:20,162,644-20,165,919 Size: 3,276 Total Exon Count: 5 Strand: +
Coding Region
   Position: dm3 chr3R:20,162,756-20,165,789 Size: 3,034 Coding Exon Count: 5 

Page IndexSequence and LinksMicroarray ExpressionProtein StructureOther SpeciesGO Annotations
SynonymsmRNA DescriptionsOther NamesMethods
Data last updated: 2008-10-21

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr3R:20,162,644-20,165,919)mRNAProtein (674 aa)
Gene SorterGenome BrowserOther Species FASTATable SchemaFlyBasePubMed
RefSeqUniProtKB

-  Microarray Expression Data
 
Expression ratio colors:

Arbeitman et al. 2002 Life-Cycle Expression Data

     
          
          
     
     
Ratios
     
          
          
     
     
Absolute
       
   
          
     
     
Ratios
       
   
          
     
     
Absolute
           
Ratios
           
Absolute

-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR024597 - Acyl-CoA_synth_DUF3448
IPR000873 - AMP-dep_Synth/Lig
IPR025110 - DUF4009

Pfam Domains:
PF00501 - AMP-binding enzyme
PF11930 - n/a
PF13193 - AMP-binding enzyme C-terminal domain

ModBase Predicted Comparative 3D Structure on Q9VC92
FrontTopSide
The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
HumanMouseRatZebrafishC. elegansS. cerevisiae
No orthologNo orthologNo orthologGenome BrowserNo orthologNo ortholog
Gene DetailsGene Details    
Gene SorterGene Sorter    
   Ensembl  
   Protein Sequence  
   Alignment  

-  Gene Ontology (GO) Annotations with Structured Vocabulary
  Molecular Function:
GO:0003987 acetate-CoA ligase activity

Biological Process:
GO:0006631 fatty acid metabolic process


-  FlyBase Synonyms for Gene and Its Alleles [Jan. 2006 data]
  Symbol: CG6432 Name: CG6432 BDGP: CG6432-RA FlyBase: FBgn0039184
Synonyms: CG6432+

-  Descriptions from all associated GenBank mRNAs
  AJ276897 - Drosophila melanogaster mRNA for putative exoribonuclease DIS3.
AY118498 - Drosophila melanogaster LD08354 full insert cDNA.
AY089507 - Drosophila melanogaster GH15945 full insert cDNA.
FJ630980 - Synthetic construct Drosophila melanogaster clone BO07890 encodes CG6432-RA.
FJ638802 - Synthetic construct Drosophila melanogaster clone BS07490 encodes CG6432-RA.

-  Other Names for This Gene
  UCSC ID: CG6432-RA
RefSeq Accession: NM_142990
Protein: Q9VC92

-  FlyBase Genes Methods, Credits, and Data Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.