T cell ATACseq & ChIPseq Tracks
T cell ATACseq & ChIPseq Tracks
Maintained by: Pipkin Lab; Contact: mpipkin@scripps.edu ; Github: ScrippsPipkinLab
ATACseq of murine CD8 T cells
- In vitro TCR stimulation time points: 0, 2, 6, 12, 24 hours. WT and Runx3KO P14 cells. Link to article GSE111149
- In vitro cultured CD8 T cells at high(100U) / low(10U) IL-2 levels, with different combinations of PMA/Iono/CsA stimulation Link to article GSE88987
- In vivo sorted CD8 T cells phenotypes: Naive, MPEC, SLEC, Memory,Exhausted Link to article GSE88987
Reference ChIPseq of key transcription factors
- Bach2
- BATF
- cJun
- IRF4
- JunB
- JunD
- Runx3 day6 (d6)
- Runx3 ex vivo
- Stat5a
- Stat5b
- Tbet
- Tcf7
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