Human Dec. 2013 (GRCh38/hg38) Browser Sequences
 
Enter a position, or click on a sequence name to view the entire sequence in the genome browser.

position

Sequence name   Length (bp) including gaps   alias sequence names  
chr1 248,956,422   1, CM000663.2, NC_000001.11
chr2 242,193,529   2, CM000664.2, NC_000002.12
chr3 198,295,559   3, CM000665.2, NC_000003.12
chr4 190,214,555   4, CM000666.2, NC_000004.12
chr5 181,538,259   5, CM000667.2, NC_000005.10
chr6 170,805,979   6, CM000668.2, NC_000006.12
chr7 159,345,973   7, CM000669.2, NC_000007.14
chr8 145,138,636   8, CM000670.2, NC_000008.11
chr9 138,394,717   9, CM000671.2, NC_000009.12
chr10 133,797,422   10, CM000672.2, NC_000010.11
chr11 135,086,622   11, CM000673.2, NC_000011.10
chr12 133,275,309   12, CM000674.2, NC_000012.12
chr13 114,364,328   13, CM000675.2, NC_000013.11
chr14 107,043,718   14, CM000676.2, NC_000014.9
chr15 101,991,189   15, CM000677.2, NC_000015.10
chr16 90,338,345   16, CM000678.2, NC_000016.10
chr17 83,257,441   17, CM000679.2, NC_000017.11
chr18 80,373,285   18, CM000680.2, NC_000018.10
chr19 58,617,616   19, CM000681.2, NC_000019.10
chr20 64,444,167   20, CM000682.2, NC_000020.11
chr21 46,709,983   21, CM000683.2, NC_000021.9
chr22 50,818,468   22, CM000684.2, NC_000022.11
chrX 156,040,895   CM000685.2, NC_000023.11, X
chrY 57,227,415   CM000686.2, NC_000024.10, Y
chrM 16,569   J01415.2, MT, NC_012920.1
chr1_GL383518v1_alt 182,439   GL383518.1, HSCHR1_1_CTG31, NW_003315905.1
chr1_GL383519v1_alt 110,268   GL383519.1, HSCHR1_2_CTG31, NW_003315906.1
chr1_GL383520v2_alt 366,580   GL383520.2, HSCHR1_3_CTG31, NW_003315907.2
chr1_KI270759v1_alt 425,601   HSCHR1_1_CTG32_1, KI270759.1, NT_187516.1
chr1_KI270760v1_alt 109,528   HSCHR1_1_CTG11, KI270760.1, NT_187514.1
chr1_KI270761v1_alt 165,834   HSCHR1_2_CTG32_1, KI270761.1, NT_187518.1
chr1_KI270762v1_alt 354,444   HSCHR1_1_CTG3, KI270762.1, NT_187515.1
chr1_KI270763v1_alt 911,658   HSCHR1_3_CTG32_1, KI270763.1, NT_187519.1
chr1_KI270764v1_alt 50,258   HSCHR1_4_CTG32_1, KI270764.1, NT_187521.1
chr1_KI270765v1_alt 185,285   HSCHR1_4_CTG31, KI270765.1, NT_187520.1
chr1_KI270766v1_alt 256,271   HSCHR1_2_CTG3, KI270766.1, NT_187517.1
chr1_KI270892v1_alt 162,212   HSCHR1_ALT2_1_CTG32_1, KI270892.1, NT_187646.1
chr1_KN196472v1_fix 186,494   HG986_PATCH, KN196472.1, NW_009646194.1
chr1_KN196473v1_fix 166,200   HG2058_PATCH, KN196473.1, NW_009646195.1
chr1_KN196474v1_fix 122,022   HG2104_PATCH, KN196474.1, NW_009646196.1
chr1_KN538360v1_fix 460,100   HG1832_PATCH, KN538360.1, NW_011332687.1
chr1_KN538361v1_fix 305,542   HG2095_PATCH, KN538361.1, NW_011332688.1
chr1_KQ031383v1_fix 467,143   HG1342_HG2282_PATCH, KQ031383.1, NW_012132914.1
chr1_KQ458382v1_alt 141,019   HSCHR1_3_CTG3, KQ458382.1, NW_014040925.1
chr1_KQ458383v1_alt 349,938   HSCHR1_4_CTG3, KQ458383.1, NW_014040926.1
chr1_KQ458384v1_alt 212,205   HSCHR1_5_CTG32_1, KQ458384.1, NW_014040927.1
chr1_KQ983255v1_alt 278,659   HSCHR1_5_CTG3, KQ983255.1, NW_015495298.1
chr1_KV880763v1_alt 551,020   HSCHR1_6_CTG3, KV880763.1, NW_017852928.1
chr1_KZ208904v1_alt 166,136   HSCHR1_8_CTG3, KZ208904.1, NW_018654706.1
chr1_KZ208905v1_alt 140,355   HSCHR1_9_CTG3, KZ208905.1, NW_018654707.1
chr1_KZ208906v1_fix 330,031   HG2002_PATCH, KZ208906.1, NW_018654708.1
chr1_KZ559100v1_fix 44,955   HG460_PATCH, KZ559100.1, NW_019805487.1
chr1_KI270706v1_random 175,055   HSCHR1_CTG1_UNLOCALIZED, KI270706.1, NT_187361.1
chr1_KI270707v1_random 32,032   HSCHR1_CTG2_UNLOCALIZED, KI270707.1, NT_187362.1
chr1_KI270708v1_random 127,682   HSCHR1_CTG3_UNLOCALIZED, KI270708.1, NT_187363.1
chr1_KI270709v1_random 66,860   HSCHR1_CTG4_UNLOCALIZED, KI270709.1, NT_187364.1
chr1_KI270710v1_random 40,176   HSCHR1_CTG5_UNLOCALIZED, KI270710.1, NT_187365.1
chr1_KI270711v1_random 42,210   HSCHR1_CTG6_UNLOCALIZED, KI270711.1, NT_187366.1
chr1_KI270712v1_random 176,043   HSCHR1_CTG7_UNLOCALIZED, KI270712.1, NT_187367.1
chr1_KI270713v1_random 40,745   HSCHR1_CTG8_UNLOCALIZED, KI270713.1, NT_187368.1
chr1_KI270714v1_random 41,717   HSCHR1_CTG9_UNLOCALIZED, KI270714.1, NT_187369.1
chr2_GL383521v1_alt 143,390   GL383521.1, HSCHR2_1_CTG5, NW_003315908.1
chr2_GL383522v1_alt 123,821   GL383522.1, HSCHR2_1_CTG7_2, NW_003315909.1
chr2_GL582966v2_alt 96,131   GL582966.2, HSCHR2_2_CTG7_2, NW_003571033.2
chr2_KI270767v1_alt 161,578   HSCHR2_1_CTG15, KI270767.1, NT_187523.1
chr2_KI270768v1_alt 110,099   HSCHR2_3_CTG7_2, KI270768.1, NT_187528.1
chr2_KI270769v1_alt 120,616   HSCHR2_1_CTG1, KI270769.1, NT_187522.1
chr2_KI270770v1_alt 136,240   HSCHR2_2_CTG1, KI270770.1, NT_187525.1
chr2_KI270771v1_alt 110,395   HSCHR2_4_CTG7_2, KI270771.1, NT_187530.1
chr2_KI270772v1_alt 133,041   HSCHR2_1_CTG7, KI270772.1, NT_187524.1
chr2_KI270773v1_alt 70,887   HSCHR2_3_CTG1, KI270773.1, NT_187526.1
chr2_KI270774v1_alt 223,625   HSCHR2_4_CTG1, KI270774.1, NT_187529.1
chr2_KI270775v1_alt 138,019   HSCHR2_5_CTG7_2, KI270775.1, NT_187531.1
chr2_KI270776v1_alt 174,166   HSCHR2_3_CTG15, KI270776.1, NT_187527.1
chr2_KI270893v1_alt 161,218   HSCHR2_2_CTG15, KI270893.1, NT_187647.1
chr2_KI270894v1_alt 214,158   HSCHR2_2_CTG7, KI270894.1, NT_187648.1
chr2_KN538362v1_fix 208,149   HG2233_PATCH, KN538362.1, NW_011332689.1
chr2_KN538363v1_fix 365,499   HG2232_PATCH, KN538363.1, NW_011332690.1
chr2_KQ031384v1_fix 481,245   HG2290_PATCH, KQ031384.1, NW_012132915.1
chr2_KQ983256v1_alt 535,088   HSCHR2_6_CTG7_2, KQ983256.1, NW_015495299.1
chr2_KZ208907v1_alt 181,658   HSCHR2_7_CTG7_2, KZ208907.1, NW_018654709.1
chr2_KZ208908v1_alt 140,361   HSCHR2_8_CTG7_2, KZ208908.1, NW_018654710.1
chr2_ML143341v1_fix 145,975   HG721_PATCH, ML143341.1, NW_021159987.1
chr2_ML143342v1_fix 84,043   HG1384_PATCH, ML143342.1, NW_021159988.1
chr2_KI270715v1_random 161,471   HSCHR2_RANDOM_CTG1, KI270715.1, NT_187370.1
chr2_KI270716v1_random 153,799   HSCHR2_RANDOM_CTG2, KI270716.1, NT_187371.1
chr3_GL383526v1_alt 180,671   GL383526.1, HSCHR3_1_CTG2_1, NW_003315913.1
chr3_JH636055v2_alt 173,151   HSCHR3_1_CTG1, JH636055.2, NW_003871060.2
chr3_KI270777v1_alt 173,649   HSCHR3_2_CTG2_1, KI270777.1, NT_187533.1
chr3_KI270778v1_alt 248,252   HSCHR3_3_CTG2_1, KI270778.1, NT_187536.1
chr3_KI270779v1_alt 205,312   HSCHR3_1_CTG3, KI270779.1, NT_187532.1
chr3_KI270780v1_alt 224,108   HSCHR3_4_CTG2_1, KI270780.1, NT_187537.1
chr3_KI270781v1_alt 113,034   HSCHR3_5_CTG2_1, KI270781.1, NT_187538.1
chr3_KI270782v1_alt 162,429   HSCHR3_2_CTG3, KI270782.1, NT_187534.1
chr3_KI270783v1_alt 109,187   HSCHR3_3_CTG1, KI270783.1, NT_187535.1
chr3_KI270784v1_alt 184,404   HSCHR3_9_CTG3, KI270784.1, NT_187539.1
chr3_KI270895v1_alt 162,896   HSCHR3_3_CTG3, KI270895.1, NT_187649.1
chr3_KI270924v1_alt 166,540   HSCHR3_4_CTG3, KI270924.1, NT_187678.1
chr3_KI270934v1_alt 163,458   HSCHR3_5_CTG3, KI270934.1, NT_187688.1
chr3_KI270935v1_alt 197,351   HSCHR3_6_CTG3, KI270935.1, NT_187689.1
chr3_KI270936v1_alt 164,170   HSCHR3_7_CTG3, KI270936.1, NT_187690.1
chr3_KI270937v1_alt 165,607   HSCHR3_8_CTG3, KI270937.1, NT_187691.1
chr3_KN196475v1_fix 451,168   HG2066_PATCH, KN196475.1, NW_009646197.1
chr3_KN196476v1_fix 305,979   HG2022_PATCH, KN196476.1, NW_009646198.1
chr3_KN538364v1_fix 415,308   HG126_PATCH, KN538364.1, NW_011332691.1
chr3_KQ031385v1_fix 373,699   HG2235_PATCH, KQ031385.1, NW_012132916.1
chr3_KQ031386v1_fix 165,718   HG2237_PATCH, KQ031386.1, NW_012132917.1
chr3_KV766192v1_fix 411,654   HG2236_PATCH, KV766192.1, NW_017363813.1
chr3_KZ208909v1_alt 175,849   HSCHR3_4_CTG1, KZ208909.1, NW_018654711.1
chr3_KZ559101v1_alt 164,041   HSCHR3_7_CTG2_1, KZ559101.1, NW_019805488.1
chr3_KZ559102v1_alt 197,752   HSCHR3_8_CTG2_1, KZ559102.1, NW_019805489.1
chr3_KZ559103v1_alt 302,885   HSCHR3_9_CTG2_1, KZ559103.1, NW_019805490.1
chr3_KZ559104v1_fix 105,527   HG2133_PATCH, KZ559104.1, NW_019805491.1
chr3_KZ559105v1_alt 195,063   HSCHR3_6_CTG2_1, KZ559105.1, NW_019805492.1
chr3_ML143343v1_alt 215,443   HSCHR3_5_CTG1, ML143343.1, NW_021159989.1
chr3_GL000221v1_random 155,397   GL000221.1, HSCHR3UN_CTG2, NT_167215.1
chr4_GL000257v2_alt 586,476   GL000257.2, HSCHR4_1_CTG9, NT_167250.2
chr4_GL383527v1_alt 164,536   GL383527.1, HSCHR4_1_CTG12, NW_003315914.1
chr4_GL383528v1_alt 376,187   GL383528.1, HSCHR4_1_CTG6, NW_003315915.1
chr4_KI270785v1_alt 119,912   HSCHR4_2_CTG12, KI270785.1, NT_187542.1
chr4_KI270786v1_alt 244,096   HSCHR4_3_CTG12, KI270786.1, NT_187543.1
chr4_KI270787v1_alt 111,943   HSCHR4_1_CTG8_1, KI270787.1, NT_187541.1
chr4_KI270788v1_alt 158,965   HSCHR4_4_CTG12, KI270788.1, NT_187544.1
chr4_KI270789v1_alt 205,944   HSCHR4_5_CTG12, KI270789.1, NT_187545.1
chr4_KI270790v1_alt 220,246   HSCHR4_1_CTG4, KI270790.1, NT_187540.1
chr4_KI270896v1_alt 378,547   HSCHR4_6_CTG12, KI270896.1, NT_187650.1
chr4_KI270925v1_alt 555,799   HSCHR4_7_CTG12, KI270925.1, NT_187679.1
chr4_KQ090013v1_alt 90,922   HSCHR4_2_CTG4, KQ090013.1, NW_013171799.1
chr4_KQ090014v1_alt 163,749   HSCHR4_8_CTG12, KQ090014.1, NW_013171800.1
chr4_KQ090015v1_alt 236,512   HSCHR4_9_CTG12, KQ090015.1, NW_013171801.1
chr4_KQ983257v1_fix 230,434   HG2023_PATCH, KQ983257.1, NW_015495300.1
chr4_KQ983258v1_alt 205,407   HSCHR4_11_CTG12, KQ983258.1, NW_015495301.1
chr4_KV766193v1_alt 420,675   HSCHR4_12_CTG12, KV766193.1, NW_017363814.1
chr4_ML143344v1_fix 235,734   HG699_PATCH, ML143344.1, NW_021159990.1
chr4_ML143345v1_fix 341,066   HG2525_PATCH, ML143345.1, NW_021159991.1
chr4_ML143346v1_fix 53,476   HG1299_PATCH, ML143346.1, NW_021159992.1
chr4_ML143347v1_fix 176,674   HG1298_PATCH, ML143347.1, NW_021159993.1
chr4_ML143348v1_fix 125,549   HG1296_PATCH, ML143348.1, NW_021159994.1
chr4_ML143349v1_fix 276,109   HG705_PATCH, ML143349.1, NW_021159995.1
chr4_GL000008v2_random 209,709   GL000008.2, HSCHR4_RANDOM_CTG4, NT_113793.3
chr5_GL339449v2_alt 1,612,928   GL339449.2, HSCHR5_2_CTG1_1, NW_003315917.2
chr5_GL383530v1_alt 101,241   GL383530.1, HSCHR5_3_CTG1_1, NW_003315918.1
chr5_GL383531v1_alt 173,459   GL383531.1, HSCHR5_1_CTG5, NW_003315919.1
chr5_GL383532v1_alt 82,728   GL383532.1, HSCHR5_1_CTG1, NW_003315920.1
chr5_GL949742v1_alt 226,852   GL949742.1, HSCHR5_2_CTG1, NW_003571036.1
chr5_KI270791v1_alt 195,710   HSCHR5_3_CTG1, KI270791.1, NT_187547.1
chr5_KI270792v1_alt 179,043   HSCHR5_4_CTG1, KI270792.1, NT_187548.1
chr5_KI270793v1_alt 126,136   HSCHR5_5_CTG1, KI270793.1, NT_187550.1
chr5_KI270794v1_alt 164,558   HSCHR5_6_CTG1, KI270794.1, NT_187551.1
chr5_KI270795v1_alt 131,892   HSCHR5_2_CTG5, KI270795.1, NT_187546.1
chr5_KI270796v1_alt 172,708   HSCHR5_4_CTG1_1, KI270796.1, NT_187549.1
chr5_KI270897v1_alt 1,144,418   HSCHR5_1_CTG1_1, KI270897.1, NT_187651.1
chr5_KI270898v1_alt 130,957   HSCHR5_3_CTG5, KI270898.1, NT_187652.1
chr5_KN196477v1_alt 139,087   HSCHR5_7_CTG1, KN196477.1, NW_009646199.1
chr5_KV575243v1_alt 362,221   HSCHR5_8_CTG1, KV575243.1, NW_016107297.1
chr5_KV575244v1_fix 673,059   HG30_PATCH, KV575244.1, NW_016107298.1
chr5_KZ208910v1_alt 135,987   HSCHR5_9_CTG1, KZ208910.1, NW_018654712.1
chr5_ML143350v1_fix 89,956   HG1395_PATCH, ML143350.1, NW_021159996.1
chr5_GL000208v1_random 92,689   GL000208.1, HSCHR5_RANDOM_CTG1, NT_113948.1
chr6_GL000250v2_alt 4,672,374   GL000250.2, HSCHR6_MHC_APD_CTG1, NT_167244.2
chr6_GL000251v2_alt 4,795,265   GL000251.2, HSCHR6_MHC_COX_CTG1, NT_113891.3
chr6_GL000252v2_alt 4,604,811   GL000252.2, HSCHR6_MHC_DBB_CTG1, NT_167245.2
chr6_GL000253v2_alt 4,677,643   GL000253.2, HSCHR6_MHC_MANN_CTG1, NT_167246.2
chr6_GL000254v2_alt 4,827,813   GL000254.2, HSCHR6_MHC_MCF_CTG1, NT_167247.2
chr6_GL000255v2_alt 4,606,388   GL000255.2, HSCHR6_MHC_QBL_CTG1, NT_167248.2
chr6_GL000256v2_alt 4,929,269   GL000256.2, HSCHR6_MHC_SSTO_CTG1, NT_167249.2
chr6_GL383533v1_alt 124,736   GL383533.1, HSCHR6_1_CTG2, NW_003315921.1
chr6_KB021644v2_alt 185,823   HSCHR6_1_CTG3, KB021644.2, NW_004166862.2
chr6_KI270758v1_alt 76,752   HSCHR6_8_CTG1, KI270758.1, NT_187692.1
chr6_KI270797v1_alt 197,536   HSCHR6_1_CTG4, KI270797.1, NT_187552.1
chr6_KI270798v1_alt 271,782   HSCHR6_1_CTG5, KI270798.1, NT_187553.1
chr6_KI270799v1_alt 152,148   HSCHR6_1_CTG6, KI270799.1, NT_187554.1
chr6_KI270800v1_alt 175,808   HSCHR6_1_CTG7, KI270800.1, NT_187555.1
chr6_KI270801v1_alt 870,480   HSCHR6_1_CTG8, KI270801.1, NT_187556.1
chr6_KI270802v1_alt 75,005   HSCHR6_1_CTG9, KI270802.1, NT_187557.1
chr6_KN196478v1_fix 268,330   HG2128_PATCH, KN196478.1, NW_009646200.1
chr6_KQ031387v1_fix 320,750   HG1651_PATCH, KQ031387.1, NW_012132918.1
chr6_KQ090016v1_fix 245,716   HG2072_PATCH, KQ090016.1, NW_013171802.1
chr6_KQ090017v1_alt 82,315   HSCHR6_1_CTG10, KQ090017.1, NW_013171803.1
chr6_KV766194v1_fix 139,427   HG2121_PATCH, KV766194.1, NW_017363815.1
chr6_KZ208911v1_fix 242,796   HG2057_PATCH, KZ208911.1, NW_018654713.1
chr6_ML143351v1_fix 73,265   HG563_PATCH, ML143351.1, NW_021159997.1
chr7_GL383534v2_alt 119,183   GL383534.2, HSCHR7_1_CTG6, NW_003315922.2
chr7_KI270803v1_alt 1,111,570   HSCHR7_2_CTG6, KI270803.1, NT_187562.1
chr7_KI270804v1_alt 157,952   HSCHR7_1_CTG1, KI270804.1, NT_187558.1
chr7_KI270805v1_alt 209,988   HSCHR7_1_CTG7, KI270805.1, NT_187560.1
chr7_KI270806v1_alt 158,166   HSCHR7_1_CTG4_4, KI270806.1, NT_187559.1
chr7_KI270807v1_alt 126,434   HSCHR7_2_CTG7, KI270807.1, NT_187563.1
chr7_KI270808v1_alt 271,455   HSCHR7_3_CTG6, KI270808.1, NT_187564.1
chr7_KI270809v1_alt 209,586   HSCHR7_2_CTG4_4, KI270809.1, NT_187561.1
chr7_KI270899v1_alt 190,869   HSCHR7_2_CTG1, KI270899.1, NT_187653.1
chr7_KQ031388v1_fix 179,932   HG2239_PATCH, KQ031388.1, NW_012132919.1
chr7_KV880764v1_fix 142,129   HG2088_PATCH, KV880764.1, NW_017852929.1
chr7_KV880765v1_fix 468,267   HG2266_PATCH, KV880765.1, NW_017852930.1
chr7_KZ208912v1_fix 589,656   HG708_PATCH, KZ208912.1, NW_018654714.1
chr7_KZ208913v1_alt 680,662   HSCHR7_3_CTG4_4, KZ208913.1, NW_018654715.1
chr7_KZ559106v1_alt 172,555   HSCHR7_3_CTG1, KZ559106.1, NW_019805493.1
chr7_ML143352v1_fix 254,759   HG1309_PATCH, ML143352.1, NW_021159998.1
chr8_KI270810v1_alt 374,415   HSCHR8_1_CTG7, KI270810.1, NT_187567.1
chr8_KI270811v1_alt 292,436   HSCHR8_1_CTG1, KI270811.1, NT_187565.1
chr8_KI270812v1_alt 282,736   HSCHR8_2_CTG1, KI270812.1, NT_187568.1
chr8_KI270813v1_alt 300,230   HSCHR8_3_CTG1, KI270813.1, NT_187570.1
chr8_KI270814v1_alt 141,812   HSCHR8_1_CTG6, KI270814.1, NT_187566.1
chr8_KI270815v1_alt 132,244   HSCHR8_2_CTG7, KI270815.1, NT_187569.1
chr8_KI270816v1_alt 305,841   HSCHR8_3_CTG7, KI270816.1, NT_187571.1
chr8_KI270817v1_alt 158,983   HSCHR8_4_CTG7, KI270817.1, NT_187573.1
chr8_KI270818v1_alt 145,606   HSCHR8_4_CTG1, KI270818.1, NT_187572.1
chr8_KI270819v1_alt 133,535   HSCHR8_5_CTG7, KI270819.1, NT_187574.1
chr8_KI270820v1_alt 36,640   HSCHR8_6_CTG7, KI270820.1, NT_187575.1
chr8_KI270821v1_alt 985,506   HSCHR8_8_CTG1, KI270821.1, NT_187576.1
chr8_KI270822v1_alt 624,492   HSCHR8_9_CTG1, KI270822.1, NT_187577.1
chr8_KI270900v1_alt 318,687   HSCHR8_5_CTG1, KI270900.1, NT_187654.1
chr8_KI270901v1_alt 136,959   HSCHR8_6_CTG1, KI270901.1, NT_187655.1
chr8_KI270926v1_alt 229,282   HSCHR8_7_CTG1, KI270926.1, NT_187680.1
chr8_KV880766v1_fix 156,998   HG2067_PATCH, KV880766.1, NW_017852931.1
chr8_KV880767v1_fix 265,876   HG2068_PATCH, KV880767.1, NW_017852932.1
chr8_KZ208914v1_fix 165,120   HG2419_PATCH, KZ208914.1, NW_018654716.1
chr8_KZ208915v1_fix 6,367,528   HG76_PATCH, KZ208915.1, NW_018654717.1
chr8_KZ559107v1_alt 103,072   HSCHR8_7_CTG7, KZ559107.1, NW_019805494.1
chr9_GL383539v1_alt 162,988   GL383539.1, HSCHR9_1_CTG1, NW_003315928.1
chr9_GL383540v1_alt 71,551   GL383540.1, HSCHR9_1_CTG2, NW_003315929.1
chr9_GL383541v1_alt 171,286   GL383541.1, HSCHR9_1_CTG3, NW_003315930.1
chr9_GL383542v1_alt 60,032   GL383542.1, HSCHR9_1_CTG4, NW_003315931.1
chr9_KI270823v1_alt 439,082   HSCHR9_1_CTG5, KI270823.1, NT_187578.1
chr9_KN196479v1_fix 330,164   HG2030_PATCH, KN196479.1, NW_009646201.1
chr9_KQ090018v1_alt 163,882   HSCHR9_1_CTG6, KQ090018.1, NW_013171804.1
chr9_KQ090019v1_alt 134,099   HSCHR9_1_CTG7, KQ090019.1, NW_013171805.1
chr9_ML143353v1_fix 25,408   HG613_PATCH, ML143353.1, NW_021159999.1
chr9_KI270717v1_random 40,062   HSCHR9_UNLOCALIZED_CTG1, KI270717.1, NT_187372.1
chr9_KI270718v1_random 38,054   HSCHR9_UNLOCALIZED_CTG2, KI270718.1, NT_187373.1
chr9_KI270719v1_random 176,845   HSCHR9_UNLOCALIZED_CTG3, KI270719.1, NT_187374.1
chr9_KI270720v1_random 39,050   HSCHR9_UNLOCALIZED_CTG4, KI270720.1, NT_187375.1
chr10_GL383545v1_alt 179,254   GL383545.1, HSCHR10_1_CTG1, NW_003315934.1
chr10_GL383546v1_alt 309,802   GL383546.1, HSCHR10_1_CTG2, NW_003315935.1
chr10_KI270824v1_alt 181,496   HSCHR10_1_CTG3, KI270824.1, NT_187579.1
chr10_KI270825v1_alt 188,315   HSCHR10_1_CTG4, KI270825.1, NT_187580.1
chr10_KN196480v1_fix 277,797   HG2191_PATCH, KN196480.1, NW_009646202.1
chr10_KN538365v1_fix 14,347   HG2241_PATCH, KN538365.1, NW_011332692.1
chr10_KN538366v1_fix 85,284   HG2242_HG2243_PATCH, KN538366.1, NW_011332693.1
chr10_KN538367v1_fix 420,164   HG2244_HG2245_PATCH, KN538367.1, NW_011332694.1
chr10_KQ090020v1_alt 185,507   HSCHR10_1_CTG6, KQ090020.1, NW_013171806.1
chr10_KQ090021v1_fix 264,545   HG2334_PATCH, KQ090021.1, NW_013171807.1
chr10_ML143354v1_fix 454,963   HG545_PATCH, ML143354.1, NW_021160000.1
chr10_ML143355v1_fix 292,944   HG1277_PATCH, ML143355.1, NW_021160001.1
chr11_GL383547v1_alt 154,407   GL383547.1, HSCHR11_1_CTG1_1, NW_003315936.1
chr11_JH159136v1_alt 200,998   HG142_HG150_NOVEL_TEST, JH159136.1, NW_003871073.1
chr11_JH159137v1_alt 191,409   HG151_NOVEL_TEST, JH159137.1, NW_003871074.1
chr11_KI270826v1_alt 186,169   HSCHR11_1_CTG2, KI270826.1, NT_187581.1
chr11_KI270827v1_alt 67,707   HSCHR11_1_CTG3, KI270827.1, NT_187582.1
chr11_KI270829v1_alt 204,059   HSCHR11_1_CTG5, KI270829.1, NT_187583.1
chr11_KI270830v1_alt 177,092   HSCHR11_1_CTG6, KI270830.1, NT_187584.1
chr11_KI270831v1_alt 296,895   HSCHR11_1_CTG7, KI270831.1, NT_187585.1
chr11_KI270832v1_alt 210,133   HSCHR11_1_CTG8, KI270832.1, NT_187586.1
chr11_KI270902v1_alt 106,711   HSCHR11_2_CTG1, KI270902.1, NT_187656.1
chr11_KI270903v1_alt 214,625   HSCHR11_2_CTG1_1, KI270903.1, NT_187657.1
chr11_KI270927v1_alt 218,612   HSCHR11_3_CTG1, KI270927.1, NT_187681.1
chr11_KN196481v1_fix 108,875   HG2217_PATCH, KN196481.1, NW_009646203.1
chr11_KN538368v1_alt 203,552   HSCHR11_1_CTG1_2, KN538368.1, NW_011332695.1
chr11_KQ090022v1_fix 181,958   HG2116_PATCH, KQ090022.1, NW_013171808.1
chr11_KQ759759v1_fix 196,940   HG107_PATCH, KQ759759.1, NW_015148966.1
chr11_KV766195v1_fix 140,877   HG1708_PATCH, KV766195.1, NW_017363816.1
chr11_KZ559108v1_fix 305,244   HG2060_PATCH, KZ559108.1, NW_019805495.1
chr11_KZ559109v1_fix 279,644   HG2114_PATCH, KZ559109.1, NW_019805496.1
chr11_KZ559110v1_alt 301,637   HSCHR11_2_CTG8, KZ559110.1, NW_019805497.1
chr11_KZ559111v1_alt 181,167   HSCHR11_1_CTG3_1, KZ559111.1, NW_019805498.1
chr11_ML143356v1_fix 45,257   HG1521_PATCH, ML143356.1, NW_021160002.1
chr11_ML143357v1_fix 165,419   HG1445_PATCH, ML143357.1, NW_021160003.1
chr11_ML143358v1_fix 270,122   HG28_PATCH, ML143358.1, NW_021160004.1
chr11_ML143359v1_fix 217,075   HG2115_PATCH, ML143359.1, NW_021160005.1
chr11_ML143360v1_fix 170,928   HG2111_PATCH, ML143360.1, NW_021160006.1
chr11_KI270721v1_random 100,316   HSCHR11_CTG1_UNLOCALIZED, KI270721.1, NT_187376.1
chr12_GL383549v1_alt 120,804   GL383549.1, HSCHR12_1_CTG2, NW_003315938.1
chr12_GL383550v2_alt 169,178   GL383550.2, HSCHR12_1_CTG2_1, NW_003315939.2
chr12_GL383551v1_alt 184,319   GL383551.1, HSCHR12_4_CTG2_1, NW_003315940.1
chr12_GL383552v1_alt 138,655   GL383552.1, HSCHR12_2_CTG2_1, NW_003315941.1
chr12_GL383553v2_alt 152,874   GL383553.2, HSCHR12_3_CTG2_1, NW_003315942.2
chr12_GL877875v1_alt 167,313   GL877875.1, HSCHR12_1_CTG1, NW_003571049.1
chr12_GL877876v1_alt 408,271   GL877876.1, HSCHR12_2_CTG2, NW_003571050.1
chr12_KI270833v1_alt 76,061   HSCHR12_5_CTG2_1, KI270833.1, NT_187589.1
chr12_KI270834v1_alt 119,498   HSCHR12_6_CTG2_1, KI270834.1, NT_187590.1
chr12_KI270835v1_alt 238,139   HSCHR12_4_CTG2, KI270835.1, NT_187587.1
chr12_KI270836v1_alt 56,134   HSCHR12_7_CTG2_1, KI270836.1, NT_187591.1
chr12_KI270837v1_alt 40,090   HSCHR12_5_CTG2, KI270837.1, NT_187588.1
chr12_KI270904v1_alt 572,349   HSCHR12_3_CTG2, KI270904.1, NT_187658.1
chr12_KN196482v1_fix 211,377   HG23_PATCH, KN196482.1, NW_009646204.1
chr12_KN538369v1_fix 541,038   HG1362_PATCH, KN538369.1, NW_011332696.1
chr12_KN538370v1_fix 86,533   HG2247_PATCH, KN538370.1, NW_011332697.1
chr12_KQ090023v1_alt 109,323   HSCHR12_2_CTG1, KQ090023.1, NW_013171809.1
chr12_KQ759760v1_fix 315,610   HG2063_PATCH, KQ759760.1, NW_015148967.1
chr12_KZ208916v1_fix 1,046,838   HG1815_PATCH, KZ208916.1, NW_018654718.1
chr12_KZ208917v1_fix 64,689   HG2047_PATCH, KZ208917.1, NW_018654719.1
chr12_KZ208918v1_alt 174,808   HSCHR12_8_CTG2_1, KZ208918.1, NW_018654720.1
chr12_KZ559112v1_alt 154,139   HSCHR12_9_CTG2_1, KZ559112.1, NW_019805499.1
chr12_ML143361v1_fix 297,568   HG2246_HG2248_HG2276_PATCH, ML143361.1, NW_021160007.1
chr12_ML143362v1_fix 192,531   HG1398_PATCH, ML143362.1, NW_021160008.1
chr13_KI270838v1_alt 306,913   HSCHR13_1_CTG1, KI270838.1, NT_187592.1
chr13_KI270839v1_alt 180,306   HSCHR13_1_CTG2, KI270839.1, NT_187593.1
chr13_KI270840v1_alt 191,684   HSCHR13_1_CTG3, KI270840.1, NT_187594.1
chr13_KI270841v1_alt 169,134   HSCHR13_1_CTG4, KI270841.1, NT_187595.1
chr13_KI270842v1_alt 37,287   HSCHR13_1_CTG5, KI270842.1, NT_187596.1
chr13_KI270843v1_alt 103,832   HSCHR13_1_CTG6, KI270843.1, NT_187597.1
chr13_KN196483v1_fix 35,455   HG2216_PATCH, KN196483.1, NW_009646205.1
chr13_KN538371v1_fix 206,320   HG2288_HG2289_PATCH, KN538371.1, NW_011332698.1
chr13_KN538372v1_fix 356,766   HG2291_PATCH, KN538372.1, NW_011332699.1
chr13_KN538373v1_fix 148,762   HG2249_PATCH, KN538373.1, NW_011332700.1
chr13_KQ090024v1_alt 168,146   HSCHR13_1_CTG7, KQ090024.1, NW_013171810.1
chr13_KQ090025v1_alt 123,480   HSCHR13_1_CTG8, KQ090025.1, NW_013171811.1
chr13_ML143363v1_fix 7,309   HG1817_1_PATCH, ML143363.1, NW_021160009.1
chr13_ML143364v1_fix 158,944   HG1523_PATCH, ML143364.1, NW_021160010.1
chr13_ML143365v1_fix 65,394   HG1524_PATCH, ML143365.1, NW_021160011.1
chr13_ML143366v1_fix 409,912   HG2509_PATCH, ML143366.1, NW_021160012.1
chr14_KI270844v1_alt 322,166   HSCHR14_1_CTG1, KI270844.1, NT_187598.1
chr14_KI270845v1_alt 180,703   HSCHR14_2_CTG1, KI270845.1, NT_187599.1
chr14_KI270846v1_alt 1,351,393   HSCHR14_3_CTG1, KI270846.1, NT_187600.1
chr14_KI270847v1_alt 1,511,111   HSCHR14_7_CTG1, KI270847.1, NT_187601.1
chr14_KZ208919v1_alt 171,798   HSCHR14_8_CTG1, KZ208919.1, NW_018654721.1
chr14_KZ208920v1_fix 690,932   HG1_PATCH, KZ208920.1, NW_018654722.1
chr14_ML143367v1_fix 399,183   HG2510_PATCH, ML143367.1, NW_021160013.1
chr14_ML143368v1_alt 264,228   HSCHR14_9_CTG1, ML143368.1, NW_021160014.1
chr14_GL000009v2_random 201,709   GL000009.2, HSCHR14_CTG1_UNLOCALIZED, NT_113796.3
chr14_GL000194v1_random 191,469   GL000194.1, HSCHR14_CTG4_UNLOCALIZED, NT_113888.1
chr14_GL000225v1_random 211,173   GL000225.1, HSCHR14_CTG2_UNLOCALIZED, NT_167219.1
chr14_KI270722v1_random 194,050   HSCHR14_CTG3_UNLOCALIZED, KI270722.1, NT_187377.1
chr14_KI270723v1_random 38,115   HSCHR14_CTG5_UNLOCALIZED, KI270723.1, NT_187378.1
chr14_KI270724v1_random 39,555   HSCHR14_CTG6_UNLOCALIZED, KI270724.1, NT_187379.1
chr14_KI270725v1_random 172,810   HSCHR14_CTG7_UNLOCALIZED, KI270725.1, NT_187380.1
chr14_KI270726v1_random 43,739   HSCHR14_CTG8_UNLOCALIZED, KI270726.1, NT_187381.1
chr15_GL383554v1_alt 296,527   GL383554.1, HSCHR15_1_CTG8, NW_003315943.1
chr15_GL383555v2_alt 388,773   GL383555.2, HSCHR15_2_CTG8, NW_003315944.2
chr15_KI270848v1_alt 327,382   HSCHR15_1_CTG3, KI270848.1, NT_187603.1
chr15_KI270849v1_alt 244,917   HSCHR15_3_CTG8, KI270849.1, NT_187605.1
chr15_KI270850v1_alt 430,880   HSCHR15_5_CTG8, KI270850.1, NT_187606.1
chr15_KI270851v1_alt 263,054   HSCHR15_3_CTG3, KI270851.1, NT_187604.1
chr15_KI270852v1_alt 478,999   HSCHR15_1_CTG1, KI270852.1, NT_187602.1
chr15_KI270905v1_alt 5,161,414   HSCHR15_4_CTG8, KI270905.1, NT_187660.1
chr15_KI270906v1_alt 196,384   HSCHR15_2_CTG3, KI270906.1, NT_187659.1
chr15_KN538374v1_fix 4,998,962   HG2139_PATCH, KN538374.1, NW_011332701.1
chr15_KQ031389v1_alt 2,365,364   HSCHR15_6_CTG8, KQ031389.1, NW_012132920.1
chr15_ML143369v1_fix 97,763   HG2499_PATCH, ML143369.1, NW_021160015.1
chr15_ML143370v1_fix 369,264   HG2198_PATCH, ML143370.1, NW_021160016.1
chr15_ML143371v1_fix 5,500,449   HG2365_PATCH, ML143371.1, NW_021160017.1
chr15_ML143372v1_fix 396,515   HG2511_PATCH, ML143372.1, NW_021160018.1
chr15_KI270727v1_random 448,248   HSCHR15_RANDOM_CTG1, KI270727.1, NT_187382.1
chr16_GL383556v1_alt 192,462   GL383556.1, HSCHR16_1_CTG3_1, NW_003315945.1
chr16_GL383557v1_alt 89,672   GL383557.1, HSCHR16_2_CTG3_1, NW_003315946.1
chr16_KI270853v1_alt 2,659,700   HSCHR16_1_CTG1, KI270853.1, NT_187607.1
chr16_KI270854v1_alt 134,193   HSCHR16_CTG2, KI270854.1, NT_187610.1
chr16_KI270855v1_alt 232,857   HSCHR16_3_CTG1, KI270855.1, NT_187608.1
chr16_KI270856v1_alt 63,982   HSCHR16_4_CTG1, KI270856.1, NT_187609.1
chr16_KQ031390v1_alt 169,136   HSCHR16_3_CTG3_1, KQ031390.1, NW_012132921.1
chr16_KQ090026v1_alt 59,016   HSCHR16_5_CTG1, KQ090026.1, NW_013171812.1
chr16_KQ090027v1_alt 267,463   HSCHR16_4_CTG3_1, KQ090027.1, NW_013171813.1
chr16_KV880768v1_fix 1,927,115   HG926_PATCH, KV880768.1, NW_017852933.1
chr16_KZ208921v1_alt 78,609   HSCHR16_5_CTG3_1, KZ208921.1, NW_018654723.1
chr16_KZ559113v1_fix 480,415   HG2263_PATCH, KZ559113.1, NW_019805500.1
chr16_ML143373v1_fix 270,967   HG2471_PATCH, ML143373.1, NW_021160019.1
chr16_KI270728v1_random 1,872,759   HSCHR16_RANDOM_CTG1, KI270728.1, NT_187383.1
chr17_GL000258v2_alt 1,821,992   GL000258.2, HSCHR17_1_CTG5, NT_167251.2
chr17_GL383563v3_alt 375,691   GL383563.3, HSCHR17_1_CTG1, NW_003315952.3
chr17_GL383564v2_alt 133,151   GL383564.2, HSCHR17_1_CTG4, NW_003315953.2
chr17_GL383565v1_alt 223,995   GL383565.1, HSCHR17_2_CTG4, NW_003315954.1
chr17_GL383566v1_alt 90,219   GL383566.1, HSCHR17_3_CTG4, NW_003315955.1
chr17_JH159146v1_alt 278,131   HSCHR17_4_CTG4, JH159146.1, NW_003871091.1
chr17_JH159147v1_alt 70,345   HSCHR17_5_CTG4, JH159147.1, NW_003871092.1
chr17_JH159148v1_alt 88,070   HSCHR17_6_CTG4, JH159148.1, NW_003871093.1
chr17_KI270857v1_alt 2,877,074   HSCHR17_7_CTG4, KI270857.1, NT_187614.1
chr17_KI270858v1_alt 235,827   HSCHR17_8_CTG4, KI270858.1, NT_187615.1
chr17_KI270859v1_alt 108,763   HSCHR17_9_CTG4, KI270859.1, NT_187616.1
chr17_KI270860v1_alt 178,921   HSCHR17_1_CTG9, KI270860.1, NT_187612.1
chr17_KI270861v1_alt 196,688   HSCHR17_1_CTG2, KI270861.1, NT_187611.1
chr17_KI270862v1_alt 391,357   HSCHR17_2_CTG2, KI270862.1, NT_187613.1
chr17_KI270907v1_alt 137,721   HSCHR17_2_CTG1, KI270907.1, NT_187662.1
chr17_KI270908v1_alt 1,423,190   HSCHR17_2_CTG5, KI270908.1, NT_187663.1
chr17_KI270909v1_alt 325,800   HSCHR17_10_CTG4, KI270909.1, NT_187661.1
chr17_KI270910v1_alt 157,099   HSCHR17_3_CTG2, KI270910.1, NT_187664.1
chr17_KV575245v1_fix 154,723   HG2046_PATCH, KV575245.1, NW_016107299.1
chr17_KV766196v1_fix 281,919   HG2285_HG106_HG2252_PATCH, KV766196.1, NW_017363817.1
chr17_KV766197v1_alt 246,895   HSCHR17_11_CTG4, KV766197.1, NW_017363818.1
chr17_KV766198v1_alt 276,292   HSCHR17_3_CTG1, KV766198.1, NW_017363819.1
chr17_KZ559114v1_alt 116,753   HSCHR17_12_CTG4, KZ559114.1, NW_019805501.1
chr17_ML143374v1_fix 137,908   HG2087_PATCH, ML143374.1, NW_021160020.1
chr17_ML143375v1_fix 56,695   HG1320_PATCH, ML143375.1, NW_021160021.1
chr17_GL000205v2_random 185,591   GL000205.2, HSCHR17_RANDOM_CTG3, NT_113930.2
chr17_KI270729v1_random 280,839   HSCHR17_RANDOM_CTG4, KI270729.1, NT_187384.1
chr17_KI270730v1_random 112,551   HSCHR17_RANDOM_CTG5, KI270730.1, NT_187385.1
chr18_GL383567v1_alt 289,831   GL383567.1, HSCHR18_1_CTG1_1, NW_003315956.1
chr18_GL383568v1_alt 104,552   GL383568.1, HSCHR18_1_CTG2, NW_003315957.1
chr18_GL383569v1_alt 167,950   GL383569.1, HSCHR18_1_CTG2_1, NW_003315958.1
chr18_GL383570v1_alt 164,789   GL383570.1, HSCHR18_2_CTG1_1, NW_003315959.1
chr18_GL383571v1_alt 198,278   GL383571.1, HSCHR18_2_CTG2, NW_003315960.1
chr18_GL383572v1_alt 159,547   GL383572.1, HSCHR18_2_CTG2_1, NW_003315961.1
chr18_KI270863v1_alt 167,999   HSCHR18_3_CTG2_1, KI270863.1, NT_187617.1
chr18_KI270864v1_alt 111,737   HSCHR18_4_CTG1_1, KI270864.1, NT_187618.1
chr18_KI270911v1_alt 157,710   HSCHR18_ALT2_CTG2_1, KI270911.1, NT_187666.1
chr18_KI270912v1_alt 174,061   HSCHR18_ALT21_CTG2_1, KI270912.1, NT_187665.1
chr18_KQ090028v1_fix 407,387   HG2213_PATCH, KQ090028.1, NW_013171814.1
chr18_KQ458385v1_alt 205,101   HSCHR18_5_CTG1_1, KQ458385.1, NW_014040928.1
chr18_KZ208922v1_fix 93,070   HG2442_PATCH, KZ208922.1, NW_018654724.1
chr18_KZ559115v1_fix 230,843   HG2412_PATCH, KZ559115.1, NW_019805502.1
chr18_KZ559116v1_alt 163,186   HSCHR18_1_CTG1, KZ559116.1, NW_019805503.1
chr19_GL000209v2_alt 177,381   GL000209.2, HSCHR19KIR_RP5_B_HAP_CTG3_1, NT_113949.2
chr19_GL383573v1_alt 385,657   GL383573.1, HSCHR19_1_CTG2, NW_003315962.1
chr19_GL383574v1_alt 155,864   GL383574.1, HSCHR19_1_CTG3_1, NW_003315963.1
chr19_GL383575v2_alt 170,222   GL383575.2, HSCHR19_2_CTG2, NW_003315964.2
chr19_GL383576v1_alt 188,024   GL383576.1, HSCHR19_3_CTG2, NW_003315965.1
chr19_GL949746v1_alt 987,716   GL949746.1, HSCHR19LRC_COX1_CTG3_1, NW_003571054.1
chr19_GL949747v2_alt 729,520   GL949747.2, HSCHR19LRC_COX2_CTG3_1, NW_003571055.2
chr19_GL949748v2_alt 1,064,304   GL949748.2, HSCHR19LRC_LRC_I_CTG3_1, NW_003571056.2
chr19_GL949749v2_alt 1,091,841   GL949749.2, HSCHR19LRC_LRC_J_CTG3_1, NW_003571057.2
chr19_GL949750v2_alt 1,066,390   GL949750.2, HSCHR19LRC_LRC_S_CTG3_1, NW_003571058.2
chr19_GL949751v2_alt 1,002,683   GL949751.2, HSCHR19LRC_LRC_T_CTG3_1, NW_003571059.2
chr19_GL949752v1_alt 987,100   GL949752.1, HSCHR19LRC_PGF1_CTG3_1, NW_003571060.1
chr19_GL949753v2_alt 796,479   GL949753.2, HSCHR19LRC_PGF2_CTG3_1, NW_003571061.2
chr19_KI270865v1_alt 52,969   HSCHR19_4_CTG2, KI270865.1, NT_187621.1
chr19_KI270866v1_alt 43,156   HSCHR19_2_CTG3_1, KI270866.1, NT_187619.1
chr19_KI270867v1_alt 233,762   HSCHR19_3_CTG3_1, KI270867.1, NT_187620.1
chr19_KI270868v1_alt 61,734   HSCHR19_5_CTG2, KI270868.1, NT_187622.1
chr19_KI270882v1_alt 248,807   HSCHR19KIR_FH15_B_HAP_CTG3_1, KI270882.1, NT_187636.1
chr19_KI270883v1_alt 170,399   HSCHR19KIR_G085_A_HAP_CTG3_1, KI270883.1, NT_187637.1
chr19_KI270884v1_alt 157,053   HSCHR19KIR_G085_BA1_HAP_CTG3_1, KI270884.1, NT_187638.1
chr19_KI270885v1_alt 171,027   HSCHR19KIR_G248_A_HAP_CTG3_1, KI270885.1, NT_187639.1
chr19_KI270886v1_alt 204,239   HSCHR19KIR_G248_BA2_HAP_CTG3_1, KI270886.1, NT_187640.1
chr19_KI270887v1_alt 209,512   HSCHR19KIR_GRC212_AB_HAP_CTG3_1, KI270887.1, NT_187641.1
chr19_KI270888v1_alt 155,532   HSCHR19KIR_GRC212_BA1_HAP_CTG3_1, KI270888.1, NT_187642.1
chr19_KI270889v1_alt 170,698   HSCHR19KIR_LUCE_A_HAP_CTG3_1, KI270889.1, NT_187643.1
chr19_KI270890v1_alt 184,499   HSCHR19KIR_LUCE_BDEL_HAP_CTG3_1, KI270890.1, NT_187644.1
chr19_KI270891v1_alt 170,680   HSCHR19KIR_RSH_A_HAP_CTG3_1, KI270891.1, NT_187645.1
chr19_KI270914v1_alt 205,194   HSCHR19KIR_RSH_BA2_HAP_CTG3_1, KI270914.1, NT_187668.1
chr19_KI270915v1_alt 170,665   HSCHR19KIR_T7526_A_HAP_CTG3_1, KI270915.1, NT_187669.1
chr19_KI270916v1_alt 184,516   HSCHR19KIR_T7526_BDEL_HAP_CTG3_1, KI270916.1, NT_187670.1
chr19_KI270917v1_alt 190,932   HSCHR19KIR_ABC08_A1_HAP_CTG3_1, KI270917.1, NT_187671.1
chr19_KI270918v1_alt 123,111   HSCHR19KIR_ABC08_AB_HAP_C_P_CTG3_1, KI270918.1, NT_187672.1
chr19_KI270919v1_alt 170,701   HSCHR19KIR_ABC08_AB_HAP_T_P_CTG3_1, KI270919.1, NT_187673.1
chr19_KI270920v1_alt 198,005   HSCHR19KIR_FH05_A_HAP_CTG3_1, KI270920.1, NT_187674.1
chr19_KI270921v1_alt 282,224   HSCHR19KIR_FH05_B_HAP_CTG3_1, KI270921.1, NT_187675.1
chr19_KI270922v1_alt 187,935   HSCHR19KIR_FH06_A_HAP_CTG3_1, KI270922.1, NT_187676.1
chr19_KI270923v1_alt 189,352   HSCHR19KIR_FH06_BA1_HAP_CTG3_1, KI270923.1, NT_187677.1
chr19_KI270929v1_alt 186,203   HSCHR19KIR_FH08_A_HAP_CTG3_1, KI270929.1, NT_187683.1
chr19_KI270930v1_alt 200,773   HSCHR19KIR_FH08_BAX_HAP_CTG3_1, KI270930.1, NT_187684.1
chr19_KI270931v1_alt 170,148   HSCHR19KIR_FH13_A_HAP_CTG3_1, KI270931.1, NT_187685.1
chr19_KI270932v1_alt 215,732   HSCHR19KIR_FH13_BA2_HAP_CTG3_1, KI270932.1, NT_187686.1
chr19_KI270933v1_alt 170,537   HSCHR19KIR_FH15_A_HAP_CTG3_1, KI270933.1, NT_187687.1
chr19_KI270938v1_alt 1,066,800   HSCHR19_4_CTG3_1, KI270938.1, NT_187693.1
chr19_KN196484v1_fix 370,917   HG2021_PATCH, KN196484.1, NW_009646206.1
chr19_KQ458386v1_fix 405,389   HG26_PATCH, KQ458386.1, NW_014040929.1
chr19_KV575246v1_alt 163,926   HSCHR19KIR_0019-4656-A_CTG3_1, KV575246.1, NW_016107300.1
chr19_KV575247v1_alt 170,206   HSCHR19KIR_CA01-TA01_1_CTG3_1, KV575247.1, NW_016107301.1
chr19_KV575248v1_alt 168,131   HSCHR19KIR_CA01-TA01_2_CTG3_1, KV575248.1, NW_016107302.1
chr19_KV575249v1_alt 293,522   HSCHR19KIR_CA01-TB04_CTG3_1, KV575249.1, NW_016107303.1
chr19_KV575250v1_alt 241,058   HSCHR19KIR_CA01-TB01_CTG3_1, KV575250.1, NW_016107304.1
chr19_KV575251v1_alt 159,285   HSCHR19KIR_HG2394_CTG3_1, KV575251.1, NW_016107305.1
chr19_KV575252v1_alt 178,197   HSCHR19KIR_502960008-2_CTG3_1, KV575252.1, NW_016107306.1
chr19_KV575253v1_alt 166,713   HSCHR19KIR_502960008-1_CTG3_1, KV575253.1, NW_016107307.1
chr19_KV575254v1_alt 99,845   HSCHR19KIR_0010-5217-AB_CTG3_1, KV575254.1, NW_016107308.1
chr19_KV575255v1_alt 161,095   HSCHR19KIR_7191059-1_CTG3_1, KV575255.1, NW_016107309.1
chr19_KV575256v1_alt 223,118   HSCHR19KIR_0019-4656-B_CTG3_1, KV575256.1, NW_016107310.1
chr19_KV575257v1_alt 100,553   HSCHR19KIR_CA04_CTG3_1, KV575257.1, NW_016107311.1
chr19_KV575258v1_alt 156,965   HSCHR19KIR_HG2393_CTG3_1, KV575258.1, NW_016107312.1
chr19_KV575259v1_alt 171,263   HSCHR19KIR_7191059-2_CTG3_1, KV575259.1, NW_016107313.1
chr19_KV575260v1_alt 145,691   HSCHR19KIR_HG2396_CTG3_1, KV575260.1, NW_016107314.1
chr19_ML143376v1_fix 493,165   HG109_PATCH, ML143376.1, NW_021160022.1
chr20_GL383577v2_alt 128,386   GL383577.2, HSCHR20_1_CTG1, NW_003315966.2
chr20_KI270869v1_alt 118,774   HSCHR20_1_CTG2, KI270869.1, NT_187623.1
chr20_KI270870v1_alt 183,433   HSCHR20_1_CTG3, KI270870.1, NT_187624.1
chr20_KI270871v1_alt 58,661   HSCHR20_1_CTG4, KI270871.1, NT_187625.1
chr21_GL383578v2_alt 63,917   GL383578.2, HSCHR21_1_CTG1_1, NW_003315967.2
chr21_GL383579v2_alt 201,197   GL383579.2, HSCHR21_2_CTG1_1, NW_003315968.2
chr21_GL383580v2_alt 74,653   GL383580.2, HSCHR21_3_CTG1_1, NW_003315969.2
chr21_GL383581v2_alt 116,689   GL383581.2, HSCHR21_4_CTG1_1, NW_003315970.2
chr21_KI270872v1_alt 82,692   HSCHR21_5_CTG2, KI270872.1, NT_187626.1
chr21_KI270873v1_alt 143,900   HSCHR21_6_CTG1_1, KI270873.1, NT_187627.1
chr21_KI270874v1_alt 166,743   HSCHR21_8_CTG1_1, KI270874.1, NT_187628.1
chr21_ML143377v1_fix 519,485   HG2513_PATCH, ML143377.1, NW_021160023.1
chr22_GL383582v2_alt 162,811   GL383582.2, HSCHR22_1_CTG1, NW_003315971.2
chr22_GL383583v2_alt 96,924   GL383583.2, HSCHR22_1_CTG2, NW_003315972.2
chr22_KB663609v1_alt 74,013   HSCHR22_2_CTG1, KB663609.1, NW_004504305.1
chr22_KI270875v1_alt 259,914   HSCHR22_1_CTG3, KI270875.1, NT_187629.1
chr22_KI270876v1_alt 263,666   HSCHR22_1_CTG4, KI270876.1, NT_187630.1
chr22_KI270877v1_alt 101,331   HSCHR22_1_CTG5, KI270877.1, NT_187631.1
chr22_KI270878v1_alt 186,262   HSCHR22_1_CTG6, KI270878.1, NT_187632.1
chr22_KI270879v1_alt 304,135   HSCHR22_1_CTG7, KI270879.1, NT_187633.1
chr22_KI270928v1_alt 176,103   HSCHR22_3_CTG1, KI270928.1, NT_187682.1
chr22_KN196485v1_alt 156,562   HSCHR22_4_CTG1, KN196485.1, NW_009646207.1
chr22_KN196486v1_alt 153,027   HSCHR22_5_CTG1, KN196486.1, NW_009646208.1
chr22_KQ458387v1_alt 155,930   HSCHR22_6_CTG1, KQ458387.1, NW_014040930.1
chr22_KQ458388v1_alt 174,749   HSCHR22_7_CTG1, KQ458388.1, NW_014040931.1
chr22_KQ759761v1_alt 145,162   HSCHR22_8_CTG1, KQ759761.1, NW_015148968.1
chr22_KQ759762v1_fix 101,037   HG1311_PATCH, KQ759762.1, NW_015148969.1
chr22_ML143378v1_fix 461,303   HG1485_PATCH, ML143378.1, NW_021160024.1
chr22_ML143379v1_fix 12,295   HG494_PATCH, ML143379.1, NW_021160025.1
chr22_ML143380v1_fix 412,368   HG2512_PATCH, ML143380.1, NW_021160026.1
chr22_KI270731v1_random 150,754   HSCHR22_UNLOCALIZED_CTG1, KI270731.1, NT_187386.1
chr22_KI270732v1_random 41,543   HSCHR22_UNLOCALIZED_CTG2, KI270732.1, NT_187387.1
chr22_KI270733v1_random 179,772   HSCHR22_UNLOCALIZED_CTG3, KI270733.1, NT_187388.1
chr22_KI270734v1_random 165,050   HSCHR22_UNLOCALIZED_CTG4, KI270734.1, NT_187389.1
chr22_KI270735v1_random 42,811   HSCHR22_UNLOCALIZED_CTG5, KI270735.1, NT_187390.1
chr22_KI270736v1_random 181,920   HSCHR22_UNLOCALIZED_CTG6, KI270736.1, NT_187391.1
chr22_KI270737v1_random 103,838   HSCHR22_UNLOCALIZED_CTG7, KI270737.1, NT_187392.1
chr22_KI270738v1_random 99,375   HSCHR22_UNLOCALIZED_CTG8, KI270738.1, NT_187393.1
chr22_KI270739v1_random 73,985   HSCHR22_UNLOCALIZED_CTG9, KI270739.1, NT_187394.1
chrX_KI270880v1_alt 284,869   HSCHRX_1_CTG3, KI270880.1, NT_187634.1
chrX_KI270881v1_alt 144,206   HSCHRX_2_CTG12, KI270881.1, NT_187635.1
chrX_KI270913v1_alt 274,009   HSCHRX_2_CTG3, KI270913.1, NT_187667.1
chrX_KV766199v1_alt 188,004   HSCHRX_3_CTG7, KV766199.1, NW_017363820.1
chrX_ML143381v1_fix 403,128   HG439_PATCH, ML143381.1, NW_021160027.1
chrX_ML143382v1_fix 28,824   HG1506_PATCH, ML143382.1, NW_021160028.1
chrX_ML143383v1_fix 68,192   HG1507_PATCH, ML143383.1, NW_021160029.1
chrX_ML143384v1_fix 14,678   HG1509_PATCH, ML143384.1, NW_021160030.1
chrX_ML143385v1_fix 17,435   HG1466_PATCH, ML143385.1, NW_021160031.1
chrY_KI270740v1_random 37,240   HSCHRY_RANDOM_CTG1, KI270740.1, NT_187395.1
chrY_KN196487v1_fix 101,150   HG2062_PATCH, KN196487.1, NW_009646209.1
chrY_KZ208923v1_fix 48,370   HG1531_PATCH, KZ208923.1, NW_018654725.1
chrY_KZ208924v1_fix 209,722   HG1535_PATCH, KZ208924.1, NW_018654726.1
chrUn_GL000195v1 182,896   GL000195.1, HSCHRUN_RANDOM_CTG1, NT_113901.1
chrUn_GL000213v1 164,239   GL000213.1, HSCHRUN_RANDOM_CTG2, NT_167208.1
chrUn_GL000214v1 137,718   GL000214.1, HSCHRUN_RANDOM_CTG4, NT_167209.1
chrUn_GL000216v2 176,608   GL000216.2, HSCHRUN_RANDOM_CTG6, NT_167211.2
chrUn_GL000218v1 161,147   GL000218.1, HSCHRUN_RANDOM_CTG9, NT_113889.1
chrUn_GL000219v1 179,198   GL000219.1, HSCHRUN_RANDOM_CTG10, NT_167213.1
chrUn_GL000220v1 161,802   GL000220.1, HSCHRUN_RANDOM_CTG11, NT_167214.1
chrUn_GL000224v1 179,693   GL000224.1, HSCHRUN_RANDOM_CTG16, NT_167218.1
chrUn_GL000226v1 15,008   GL000226.1, HSCHRUN_RANDOM_CTG19, NT_167220.1
chrUn_KI270302v1 2,274   HSCHRUN_RANDOM_100, KI270302.1, NT_187396.1
chrUn_KI270303v1 1,942   HSCHRUN_RANDOM_102, KI270303.1, NT_187398.1
chrUn_KI270304v1 2,165   HSCHRUN_RANDOM_101, KI270304.1, NT_187397.1
chrUn_KI270305v1 1,472   HSCHRUN_RANDOM_103, KI270305.1, NT_187399.1
chrUn_KI270310v1 1,201   HSCHRUN_RANDOM_106, KI270310.1, NT_187402.1
chrUn_KI270311v1 12,399   HSCHRUN_RANDOM_110, KI270311.1, NT_187406.1
chrUn_KI270312v1 998   HSCHRUN_RANDOM_109, KI270312.1, NT_187405.1
chrUn_KI270315v1 2,276   HSCHRUN_RANDOM_108, KI270315.1, NT_187404.1
chrUn_KI270316v1 1,444   HSCHRUN_RANDOM_107, KI270316.1, NT_187403.1
chrUn_KI270317v1 37,690   HSCHRUN_RANDOM_111, KI270317.1, NT_187407.1
chrUn_KI270320v1 4,416   HSCHRUN_RANDOM_105, KI270320.1, NT_187401.1
chrUn_KI270322v1 21,476   HSCHRUN_RANDOM_104, KI270322.1, NT_187400.1
chrUn_KI270329v1 1,040   HSCHRUN_RANDOM_167, KI270329.1, NT_187459.1
chrUn_KI270330v1 1,652   HSCHRUN_RANDOM_166, KI270330.1, NT_187458.1
chrUn_KI270333v1 2,699   HSCHRUN_RANDOM_169, KI270333.1, NT_187461.1
chrUn_KI270334v1 1,368   HSCHRUN_RANDOM_168, KI270334.1, NT_187460.1
chrUn_KI270335v1 1,048   HSCHRUN_RANDOM_170, KI270335.1, NT_187462.1
chrUn_KI270336v1 1,026   HSCHRUN_RANDOM_173, KI270336.1, NT_187465.1
chrUn_KI270337v1 1,121   HSCHRUN_RANDOM_174, KI270337.1, NT_187466.1
chrUn_KI270338v1 1,428   HSCHRUN_RANDOM_171, KI270338.1, NT_187463.1
chrUn_KI270340v1 1,428   HSCHRUN_RANDOM_172, KI270340.1, NT_187464.1
chrUn_KI270362v1 3,530   HSCHRUN_RANDOM_177, KI270362.1, NT_187469.1
chrUn_KI270363v1 1,803   HSCHRUN_RANDOM_175, KI270363.1, NT_187467.1
chrUn_KI270364v1 2,855   HSCHRUN_RANDOM_176, KI270364.1, NT_187468.1
chrUn_KI270366v1 8,320   HSCHRUN_RANDOM_178, KI270366.1, NT_187470.1
chrUn_KI270371v1 2,805   HSCHRUN_RANDOM_202, KI270371.1, NT_187494.1
chrUn_KI270372v1 1,650   HSCHRUN_RANDOM_199, KI270372.1, NT_187491.1
chrUn_KI270373v1 1,451   HSCHRUN_RANDOM_200, KI270373.1, NT_187492.1
chrUn_KI270374v1 2,656   HSCHRUN_RANDOM_198, KI270374.1, NT_187490.1
chrUn_KI270375v1 2,378   HSCHRUN_RANDOM_201, KI270375.1, NT_187493.1
chrUn_KI270376v1 1,136   HSCHRUN_RANDOM_197, KI270376.1, NT_187489.1
chrUn_KI270378v1 1,048   HSCHRUN_RANDOM_179, KI270378.1, NT_187471.1
chrUn_KI270379v1 1,045   HSCHRUN_RANDOM_180, KI270379.1, NT_187472.1
chrUn_KI270381v1 1,930   HSCHRUN_RANDOM_194, KI270381.1, NT_187486.1
chrUn_KI270382v1 4,215   HSCHRUN_RANDOM_196, KI270382.1, NT_187488.1
chrUn_KI270383v1 1,750   HSCHRUN_RANDOM_190, KI270383.1, NT_187482.1
chrUn_KI270384v1 1,658   HSCHRUN_RANDOM_192, KI270384.1, NT_187484.1
chrUn_KI270385v1 990   HSCHRUN_RANDOM_195, KI270385.1, NT_187487.1
chrUn_KI270386v1 1,788   HSCHRUN_RANDOM_188, KI270386.1, NT_187480.1
chrUn_KI270387v1 1,537   HSCHRUN_RANDOM_183, KI270387.1, NT_187475.1
chrUn_KI270388v1 1,216   HSCHRUN_RANDOM_186, KI270388.1, NT_187478.1
chrUn_KI270389v1 1,298   HSCHRUN_RANDOM_181, KI270389.1, NT_187473.1
chrUn_KI270390v1 2,387   HSCHRUN_RANDOM_182, KI270390.1, NT_187474.1
chrUn_KI270391v1 1,484   HSCHRUN_RANDOM_189, KI270391.1, NT_187481.1
chrUn_KI270392v1 971   HSCHRUN_RANDOM_193, KI270392.1, NT_187485.1
chrUn_KI270393v1 1,308   HSCHRUN_RANDOM_191, KI270393.1, NT_187483.1
chrUn_KI270394v1 970   HSCHRUN_RANDOM_187, KI270394.1, NT_187479.1
chrUn_KI270395v1 1,143   HSCHRUN_RANDOM_184, KI270395.1, NT_187476.1
chrUn_KI270396v1 1,880   HSCHRUN_RANDOM_185, KI270396.1, NT_187477.1
chrUn_KI270411v1 2,646   HSCHRUN_RANDOM_113, KI270411.1, NT_187409.1
chrUn_KI270412v1 1,179   HSCHRUN_RANDOM_112, KI270412.1, NT_187408.1
chrUn_KI270414v1 2,489   HSCHRUN_RANDOM_114, KI270414.1, NT_187410.1
chrUn_KI270417v1 2,043   HSCHRUN_RANDOM_119, KI270417.1, NT_187415.1
chrUn_KI270418v1 2,145   HSCHRUN_RANDOM_116, KI270418.1, NT_187412.1
chrUn_KI270419v1 1,029   HSCHRUN_RANDOM_115, KI270419.1, NT_187411.1
chrUn_KI270420v1 2,321   HSCHRUN_RANDOM_117, KI270420.1, NT_187413.1
chrUn_KI270422v1 1,445   HSCHRUN_RANDOM_120, KI270422.1, NT_187416.1
chrUn_KI270423v1 981   HSCHRUN_RANDOM_121, KI270423.1, NT_187417.1
chrUn_KI270424v1 2,140   HSCHRUN_RANDOM_118, KI270424.1, NT_187414.1
chrUn_KI270425v1 1,884   HSCHRUN_RANDOM_122, KI270425.1, NT_187418.1
chrUn_KI270429v1 1,361   HSCHRUN_RANDOM_123, KI270429.1, NT_187419.1
chrUn_KI270435v1 92,983   HSCHRUN_RANDOM_128, KI270435.1, NT_187424.1
chrUn_KI270438v1 112,505   HSCHRUN_RANDOM_129, KI270438.1, NT_187425.1
chrUn_KI270442v1 392,061   HSCHRUN_RANDOM_124, KI270442.1, NT_187420.1
chrUn_KI270448v1 7,992   HSCHRUN_RANDOM_203, KI270448.1, NT_187495.1
chrUn_KI270465v1 1,774   HSCHRUN_RANDOM_126, KI270465.1, NT_187422.1
chrUn_KI270466v1 1,233   HSCHRUN_RANDOM_125, KI270466.1, NT_187421.1
chrUn_KI270467v1 3,920   HSCHRUN_RANDOM_127, KI270467.1, NT_187423.1
chrUn_KI270468v1 4,055   HSCHRUN_RANDOM_130, KI270468.1, NT_187426.1
chrUn_KI270507v1 5,353   HSCHRUN_RANDOM_141, KI270507.1, NT_187437.1
chrUn_KI270508v1 1,951   HSCHRUN_RANDOM_134, KI270508.1, NT_187430.1
chrUn_KI270509v1 2,318   HSCHRUN_RANDOM_132, KI270509.1, NT_187428.1
chrUn_KI270510v1 2,415   HSCHRUN_RANDOM_131, KI270510.1, NT_187427.1
chrUn_KI270511v1 8,127   HSCHRUN_RANDOM_139, KI270511.1, NT_187435.1
chrUn_KI270512v1 22,689   HSCHRUN_RANDOM_136, KI270512.1, NT_187432.1
chrUn_KI270515v1 6,361   HSCHRUN_RANDOM_140, KI270515.1, NT_187436.1
chrUn_KI270516v1 1,300   HSCHRUN_RANDOM_135, KI270516.1, NT_187431.1
chrUn_KI270517v1 3,253   HSCHRUN_RANDOM_142, KI270517.1, NT_187438.1
chrUn_KI270518v1 2,186   HSCHRUN_RANDOM_133, KI270518.1, NT_187429.1
chrUn_KI270519v1 138,126   HSCHRUN_RANDOM_137, KI270519.1, NT_187433.1
chrUn_KI270521v1 7,642   HSCHRUN_RANDOM_204, KI270521.1, NT_187496.1
chrUn_KI270522v1 5,674   HSCHRUN_RANDOM_138, KI270522.1, NT_187434.1
chrUn_KI270528v1 2,983   HSCHRUN_RANDOM_144, KI270528.1, NT_187440.1
chrUn_KI270529v1 1,899   HSCHRUN_RANDOM_143, KI270529.1, NT_187439.1
chrUn_KI270530v1 2,168   HSCHRUN_RANDOM_145, KI270530.1, NT_187441.1
chrUn_KI270538v1 91,309   HSCHRUN_RANDOM_147, KI270538.1, NT_187443.1
chrUn_KI270539v1 993   HSCHRUN_RANDOM_146, KI270539.1, NT_187442.1
chrUn_KI270544v1 1,202   HSCHRUN_RANDOM_148, KI270544.1, NT_187444.1
chrUn_KI270548v1 1,599   HSCHRUN_RANDOM_149, KI270548.1, NT_187445.1
chrUn_KI270579v1 31,033   HSCHRUN_RANDOM_158, KI270579.1, NT_187450.1
chrUn_KI270580v1 1,553   HSCHRUN_RANDOM_156, KI270580.1, NT_187448.1
chrUn_KI270581v1 7,046   HSCHRUN_RANDOM_157, KI270581.1, NT_187449.1
chrUn_KI270582v1 6,504   HSCHRUN_RANDOM_162, KI270582.1, NT_187454.1
chrUn_KI270583v1 1,400   HSCHRUN_RANDOM_154, KI270583.1, NT_187446.1
chrUn_KI270584v1 4,513   HSCHRUN_RANDOM_161, KI270584.1, NT_187453.1
chrUn_KI270587v1 2,969   HSCHRUN_RANDOM_155, KI270587.1, NT_187447.1
chrUn_KI270588v1 6,158   HSCHRUN_RANDOM_163, KI270588.1, NT_187455.1
chrUn_KI270589v1 44,474   HSCHRUN_RANDOM_159, KI270589.1, NT_187451.1
chrUn_KI270590v1 4,685   HSCHRUN_RANDOM_160, KI270590.1, NT_187452.1
chrUn_KI270591v1 5,796   HSCHRUN_RANDOM_165, KI270591.1, NT_187457.1
chrUn_KI270593v1 3,041   HSCHRUN_RANDOM_164, KI270593.1, NT_187456.1
chrUn_KI270741v1 157,432   HSCHRUN_RANDOM_CTG17, KI270741.1, NT_187497.1
chrUn_KI270742v1 186,739   HSCHRUN_RANDOM_CTG42, KI270742.1, NT_187513.1
chrUn_KI270743v1 210,658   HSCHRUN_RANDOM_CTG20, KI270743.1, NT_187498.1
chrUn_KI270744v1 168,472   HSCHRUN_RANDOM_CTG21, KI270744.1, NT_187499.1
chrUn_KI270745v1 41,891   HSCHRUN_RANDOM_CTG22, KI270745.1, NT_187500.1
chrUn_KI270746v1 66,486   HSCHRUN_RANDOM_CTG23, KI270746.1, NT_187501.1
chrUn_KI270747v1 198,735   HSCHRUN_RANDOM_CTG24, KI270747.1, NT_187502.1
chrUn_KI270748v1 93,321   HSCHRUN_RANDOM_CTG25, KI270748.1, NT_187503.1
chrUn_KI270749v1 158,759   HSCHRUN_RANDOM_CTG26, KI270749.1, NT_187504.1
chrUn_KI270750v1 148,850   HSCHRUN_RANDOM_CTG27, KI270750.1, NT_187505.1
chrUn_KI270751v1 150,742   HSCHRUN_RANDOM_CTG28, KI270751.1, NT_187506.1
chrUn_KI270752v1 27,745   HSCHRUN_RANDOM_CTG29, KI270752.1
chrUn_KI270753v1 62,944   HSCHRUN_RANDOM_CTG30, KI270753.1, NT_187508.1
chrUn_KI270754v1 40,191   HSCHRUN_RANDOM_CTG33, KI270754.1, NT_187509.1
chrUn_KI270755v1 36,723   HSCHRUN_RANDOM_CTG34, KI270755.1, NT_187510.1
chrUn_KI270756v1 79,590   HSCHRUN_RANDOM_CTG35, KI270756.1, NT_187511.1
chrUn_KI270757v1 71,251   HSCHRUN_RANDOM_CTG36, KI270757.1, NT_187512.1
Total: 640 3,272,116,950    
Download as file: hg38.chrom.sizes hg38.chromAlias.txt

Human Genome Browser – hg38 assembly (sequences)
 
Human
Homo sapiens
(Graphic courtesy of CBSE)

UCSC Genome Browser assembly ID: hg38
Sequencing/Assembly provider ID: Genome Reference Consortium Human GRCh38.p13 (GCA_000001405.28)
Assembly date: Dec. 2013 initial release; Dec. 2017 patch release 13
Assembly accession: GCA_000001405.28
NCBI Genome ID: 51 (Homo sapiens (human))
NCBI Assembly ID: GCF_000001405.39 (GRCh38.p13, GCA_000001405.28)
BioProject ID: PRJNA31257


Search the assembly:

  • By position or search term: Use the "position or search term" box to find areas of the genome associated with many different attributes, such as a specific chromosomal coordinate range; mRNA, EST, or STS marker names; or keywords from the GenBank description of an mRNA. More information, including sample queries.
  • By gene name: Type a gene name into the "search term" box, choose your gene from the drop-down list, then press "submit" to go directly to the assembly location associated with that gene. More information.
  • By track type: Click the "track search" button to find Genome Browser tracks that match specific selection criteria. More information.


Download sequence and annotation data:


Assembly Details

The GRCh38 assembly is the first major revision of the human genome released in more than four years. As with the previous GRCh37 assembly, the Genome Reference Consortium (GRC) is now the primary source for human genome assembly data submitted to GenBank. Beginning with this release, the UCSC Genome Browser version numbers for the human assemblies now match those of the GRC to minimize version confusion. Hence, the GRCh38 assembly is referred to as "hg38" in the Genome Browser datasets and documentation. For a glossary of assembly-related terms, see the GRC Assembly Terminology page.

GRCh38 Highlights

  • Alternate sequences - Several human chromosomal regions exhibit sufficient variability to prevent adequate representation by a single sequence. To address this, the GRCh38 assembly provides alternate sequence for selected variant regions through the inclusion of alternate loci scaffolds (or alt loci). Alt loci are separate accessioned sequences that are aligned to reference chromosomes. The GRCh38 initial assembly contained 261 alt loci, many of which are associated with the LRC/KIR area of chr19 and the MHC region on chr6. Subsequent GRC patch releases have added additional alt loci and fix patches. See the sequences page for the latest list of the reference chromosomes, alternate, and patch sequences in GRCh38.
  • Fix sequences - Fix patches denoted by chr__fix represent changes to the existing sequence. These are generally error corrections (such as base changes, component replacements/updates, switch point updates or tiling path changes) or assembly improvements (such as extension of sequence into gaps). These fix patch scaffold sequences are given chromosome context through alignments to the corresponding chromosome regions. A list of all chromosomes including chr_fix sequences can be found in the sequences page.
  • Centromere representation - Debuting in this release, the large megabase-sized gaps that represented centromeric regions in previous assemblies have been replaced by sequences from centromere models created by Karen Miga et al., using centromere databases developed during her work in the Willard lab at Duke University (now at the University of Chicago) and analysis software developed while working in the Kent lab at UCSC. The models, which provide the approximate repeat number and order for each centromere, will be useful for read mapping and variation studies.
  • Mitochondrial genome - The mitochondrial reference sequence included in the GRCh38 assembly (termed "chrM" in the UCSC Genome Browser) is the Revised Cambridge Reference Sequence (rCRS) from MITOMAP with GenBank accession number J01415.2 and RefSeq accession number NC_012920.1. This differs from the chrM sequence (RefSeq accession number NC_001807) provided by the Genome Browser for hg19, which was not updated when the GRCh37 assembly later transitioned to the new version.
  • Sequence updates - Several erroneous bases and misassembled regions in GRCh37 have been corrected in the GRCh38 assembly, and more than 100 gaps have been filled or reduced. Much of the data used to improve the reference sequence was obtained from other genome sequencing and analysis projects, such as the 1000 Genomes Project.
  • Analysis set - The GRCh38 assembly offers an "analysis set" that was created to accommodate next generation sequencing read alignment pipelines. To avoid false mapping of reads, duplicate copies of centromeric arrays and WGS on several chromosomes have been hard-masked with Ns. The two PAR regions on chromosome Y have also been hard-masked, and the Epstein-Barr virus sequence has been added as a decoy to attract contamination in samples. Two versions of the analysis set are available on our downloads page: one without the alternate chromosomes from this assembly, and one that includes them.

Chromosome naming conventions
UCSC has introduced some slight changes to the Genome Browser chromosome naming scheme with this release:

  • Haplotype chromosome, unplaced contig and unlocalized contig names now include their NCBI accession number (e.g., chr6_GL000256v2_alt)
  • The "v2" at the end of the accession number indicates the NCBI version number
  • Haplotype chromosome names consist of the chromosome number, followed by the NCBI accession number, followed by "alt"
  • Fix sequence names consist of the chromosomes number, followed by the NCBI accession number, followed by "fix" (e.g., chr7_KQ031388v1_fix)
  • Unlocalized contig names consist of the chromosome number, followed by the NCBI accession number, followed by "random"
  • Unplaced contig names (contigs whose associated chromosome is not known) consist of "chrUn" followed by the NCBI accession number

Pseudoautosomal regions
The Y chromosome in this assembly contains two pseudoautosomal regions (PARs) that were taken from the corresponding regions in the X chromosome and are exact duplicates:

chrY:10,000-2,781,479 and chrY:56,887,902-57,217,415
chrX:10,000-2,781,479 and chrX:155,701,382-156,030,895

Assembly statistics
For a detailed set of statistics about this assembly, see the GRCh38 GenBank record.

NumberHaplotypesFixesUnlocalized Contigs
chr11989
chr21852
chr32271
chr41671
chr51621
chr61760
chr71150
chr81740
chr9724
chr10570
chr1115111
chr121680
chr13880
chr14628
chr151051
chr161031
chr172143
chr181230
chr195830
chr20400
chr21710
chr221449
chrX450
chrY031
chrM000

TypeTotal
chromosomes25
haplotypes333
fixes113
unlocalized contigs42
unplaced contigs127
Total640

For more information about the files included in the GRCh38 GenBank submission, see the GRCh38 README. Bulk downloads of the sequence and annotation data may be obtained from the Genome Browser Downloads page or the FTP server. The annotation tracks for this browser were generated by UCSC and collaborators worldwide.

References

Miga KH, Newton Y, Jain M, Altemose N, Willard HF, Kent WJ. Centromere reference models for human chromosomes X and Y satellite arrays. Genome Res. 2014 Apr;24(4):697-707. Epub 2014 Feb 5.