Bos_indicus_1.0 Nov. 2014 hub_2100979_GCF_000247795.1 chr1:53,568,936-53,570,224 UCSC Genome Browser v505

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Skip to main content UCSC Genome Browser on Bos_indicus_1.0 Nov. 2014 zebu cattle (Nelore 2014 refseq) (GCF_000247795.1)
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chr1:53,568,936-53,570,224 1,289 bp.

Examples

Visible Tracks

GC Percent

Short Match

NCBI RefSeq

Augustus

CpG Islands

Hub: Cotney Lab Human Craniofacial Epigenomics

Track hub error : Host cotneylab.cam.uchc.edu not found --] Name or service not known netConnect() failed Couldn't open https://cotneylab.cam.uchc.edu/~jcotney/CRANIOFACIAL_HUB/Craniofacial_Data_Hub.txt

Mapping and Sequencing

Tandem Dups

Genes and Gene Predictions

NCBI RefSeq

Augustus

RNA and Transcriptome

RefSeq mRNAs

Expression and Regulation

CpG Islands

Variation and Repeats

RepeatMasker

Simple Repeats

WM + SDust

left 10%	ctrl+j	track search	t then s
left 1/2 screen	j	default tracks	d then t
left one screen	J	default order	d then o
right 10%	ctrl+l	hide all	h then a
right 1/2 screen	l	custom tracks	c then t
right one screen	L	track collections	t then c
jump to position box	/	track hubs	t then h
zoom in 1.5x	ctrl+i	configure	c then f
zoom in 3x	i	reverse	r then v
zoom in 10x	I	resize	r then s
zoom in base level	b	refresh	r then f
zoom out 1.5x	ctrl+k	view chrom names	v then s
zoom out 3x	k	send to external tool	s then t
zoom out 10x	K	exon view	e then v
zoom out 100x	0	default view	d then v
zoom to ...		view DNA	v then d
50bp (1 zero)	1	Reset all User Settings	c then r
500bp (2 zeros)	2	Tools - BLAT	t then b
5000bp (3 zeros)	3	Tools - Table Browser	t then t
50kbp (4 zeros)	4	Tools - PCR	t then i
500kbp (5 zeros)	5	My Sessions	s then s
5Mbp (6 zeros)	6	Public Sessions	p then s
highlight all (mark)	h then m	clear all Highlights	h then c
quick connect hub	c then h