UCSC Genome Browser on Mouse Dec. 2011 (GRCm38/mm10) Assembly
move zoom in zoom out
chrM:1-16,299 16,299 bp.
move start
  Click on a feature for details. Click+shift+drag to zoom in. Click side bars for track options. Drag side bars or labels up or down to reorder tracks. Drag tracks left or right to new position. Press "?" for keyboard shortcuts.   move end
Use drop-down controls below and press refresh to alter tracks displayed.
Tracks with lots of items will automatically be displayed in more compact modes.
-   Custom Tracks
CD4_naive_CMS-seq_IP_BR1_HOMER_tag_directory Total Tags = 5.27e+07, normalized to 1.00e+07
CD4_naive_CMS-seq_IP_BR2_HOMER_tag_directory Total Tags = 2.89e+07, normalized to 1.00e+07
CD4_SP_CMS-Seq_IP_BR1_HOMER_tag_directory Total Tags = 4.44e+07, normalized to 1.00e+07
CD4_SP_CMS-Seq_IP_BR2_HOMER_tag_directory Total Tags = 5.62e+07, normalized to 1.00e+07
CD8_naive_CMS-seq_IP_BR1_HOMER_tag_directory Total Tags = 4.43e+07, normalized to 1.00e+07
CD8_naive_CMS-seq_IP_BR2_HOMER_tag_directory Total Tags = 2.40e+07, normalized to 1.00e+07
CD8_SP_CMS-Seq_IP_BR1_HOMER_tag_directory Total Tags = 5.55e+07, normalized to 1.00e+07
CD8_SP_CMS-Seq_IP_BR2_HOMER_tag_directory Total Tags = 6.10e+07, normalized to 1.00e+07
DP_CMS-seq_IP_BR1_HOMER_tag_directory Total Tags = 5.15e+07, normalized to 1.00e+07
DP_CMS-seq_IP_BR2_HOMER_tag_directory Total Tags = 2.42e+07, normalized to 1.00e+07
Th1_CMS-seq_IP_BR1_HOMER_tag_directory Total Tags = 4.81e+07, normalized to 1.00e+07
Th2_CMS-seq_IP_BR2_HOMER_tag_directory Total Tags = 3.09e+07, normalized to 1.00e+07
+   Mapping and Sequencing
-   Genes and Gene Predictions
Other RefSeq
RetroGenes V6
CRISPR Targets
Geneid Genes
Genscan Genes
MGC Genes
Old UCSC Genes
ORFeome Clones
Pfam in UCSC Gene
SGP Genes
TransMap V5...
tRNA Genes
UCSC Alt Events
updated UniProt
-   Literature
Lens Patents
UniProt Variants
-   mRNA and EST
Spliced ESTs
Mouse mRNAs
Mouse ESTs
Other mRNAs
-   Expression and Regulation
Tabula Muris...
ENCODE Regulation...
CpG Islands...
ENC+EPD Enhc-Gene
EPDnew Promoters
FaceBase 24STypes
qPCR Primers
RefSeq Func Elems
-   Comparative Genomics
ClinVar Lift
Euarch Chain/Net
Glires Chain/Net
Placental Chain/Net
Vertebrate Chain/Net
Malayan flying lemur Chain/Net
Chinese hamster Chain/Net
Pig Chain/Net
Garter snake Chain/Net
-   Variation and Repeats
Common SNPs(142)
RepeatMasker Viz.
All SNPs(142)
All SNPs(138)
All SNPs(137)
Alternate strains...
[No data-chrM]
Common SNPs(138)
Common SNPs(137)
Interrupted Rpts
Mouse SNPs
Mult. SNPs(142)
Mult. SNPs(138)
Mult. SNPs(137)
Segmental Dups
Simple Repeats
WM + SDust