UCSC Genome Browser on Mouse (GRCm38/mm10)
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chr12:104,681,897-104,757,421 75,525 bp.
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  Click on a feature for details. Shift+click+drag to zoom in. Click grey side bars for track options. Drag side bars or labels up or down to reorder tracks. Drag tracks left or right to new position. Press "?" for keyboard shortcuts. Use drop-down controls below and press refresh to alter tracks displayed.   move end
  
-   Custom Tracks
stringtie_all_samples_merged.gtf
stringtie_KO_samples_merged.gtf
stringtie_WT_merged.gtf
-   coke6162_hub
20190503_RNA-seq_LM-1
20190710_ChIP-seq_platanitis2019_mm_BMDM
20190710_RNA-seq_platanitis2019_mm_BMDM
20220405_ChIP-seq_B2_evolution_cuartero
20220405_ChIP-seq_B2_evolution_gualdrini
20220405_ChIP-seq_B2_evolution_gupte
20220405_ChIP-seq_B2_evolution_piccolo
20220405_ChIP-seq_B2_evolution_platanitis
20220515_CUTnTAG_J774
20220715_MEF_M9_KD_direct_cDNA
20221001_ATAC-seq_Platanitis2022
andreu2017_rnaseq
B2_SINE_enhancers
B2_SINE_enhancers_Horton_et_al
ed_mouselines_rnaseq
fimo
lassig2018_chipseq
mappability
mostafavi2016_chipseq
Piccolo2017
piccolo2017_chipseq_rerun
yoshida2019_atacseq
-   Mapping and Sequencing
Base Position
p14 Fix Patches
All Gaps
p14 Alt Haplotypes
Assembly
Chromosome Band
Clone Ends
Contigs
Gap
GC Percent
GRC Incident
INSDC
MGI QTL
Restr Enzymes
Short Match
UCSC liftOver mm39
-   Genes and Gene Predictions
GENCODE VM23
NCBI RefSeq
GENCODE Versions
AUGUSTUS
CCDS
CRISPR 10K
CRISPR Targets
Geneid Genes
Genscan Genes
MGC Genes
Old UCSC Genes
ORFeome Clones
Other RefSeq
Pfam in UCSC Gene
RetroGenes V6
SGP Genes
TOGA vs. hg38
TransMap V5
tRNA Genes
UCSC Alt Events
UniProt
-   Literature
Lens Patents
UniProt Variants
-   mRNA and EST
Mouse ESTs
Mouse mRNAs
Other mRNAs
-   Expression and Regulation
ENCODE cCREs
Tabula Muris
CpG Islands
ENC+EPD Enhc-Gene
ENCODE Regulation
EPDnew Promoters
FaceBase 24STypes
new FANTOM5
updated JASPAR Transcription Factors
ORegAnno
qPCR Primers
RefSeq Func Elems
ReMap ChIP-seq
VISTA Enhancers
-   Comparative Genomics
Conservation
ClinVar Lift
Euarch Chain/Net
Glires Chain/Net
Placental Chain/Net
Vertebrate Chain/Net
-   Variation and Repeats
Common SNPs(142)
RepeatMasker
Alternate strains
Interrupted Rpts
Microsatellite
Mouse SNPs
dbSNP Archive
EVA SNP Release 3
EVA SNP Release 4
EVA SNP Release 5
RepeatMasker Viz.
Segmental Dups
Simple Repeats
WM + SDust
Invisible link